Gene
| Gene Model ID | pfu_aug2.0_277.1_23790 |
|---|---|
| Locus | scaffold277.1 : 24726 ... 49112 : + |
| To GenomeBrowser | scaffold277.1:24726..49112 |
| Genes list of scaffold | scaffold277.1 |
| Synonym | pfu_aug1.0_12130.1_68450 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcriptional repressor protein yy1-like isoform x2 | GO:0003676 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_277.1_23790.t1 | 5 | 1 | zf-H2C2_2 | 222 | 237 | 4.2e-18 | 64.6 | 0.07 | 74.0 | 3.9 |
| pfu_aug2.0_277.1_23790.t1 | 4 | 1 | zf-C2H2_4 | 227 | 250 | 3.7e-13 | 48.7 | 2.9e-06 | 0.0031 | 17.7 |
| pfu_aug2.0_277.1_23790.t1 | 4 | 1 | zf-C2H2 | 228 | 250 | 2.4e-17 | 62.1 | 7.2e-05 | 0.077 | 13.3 |
| pfu_aug2.0_277.1_23790.t1 | 5 | 2 | zf-H2C2_2 | 243 | 265 | 4.2e-18 | 64.6 | 6.0e-05 | 0.064 | 13.5 |
| pfu_aug2.0_277.1_23790.t1 | 4 | 2 | zf-C2H2 | 255 | 277 | 2.4e-17 | 62.1 | 1.5e-07 | 0.00016 | 21.7 |
| pfu_aug2.0_277.1_23790.t1 | 4 | 2 | zf-C2H2_4 | 256 | 277 | 3.7e-13 | 48.7 | 0.00037 | 0.39 | 11.1 |
| pfu_aug2.0_277.1_23790.t1 | 5 | 3 | zf-H2C2_2 | 270 | 295 | 4.2e-18 | 64.6 | 5.6e-10 | 5.9e-07 | 29.4 |
| pfu_aug2.0_277.1_23790.t1 | 4 | 3 | zf-C2H2 | 283 | 307 | 2.4e-17 | 62.1 | 4.7e-06 | 0.005 | 17.1 |
| pfu_aug2.0_277.1_23790.t1 | 4 | 3 | zf-C2H2_4 | 283 | 307 | 3.7e-13 | 48.7 | 0.0011 | 1.1 | 9.7 |
| pfu_aug2.0_277.1_23790.t1 | 5 | 4 | zf-H2C2_2 | 299 | 325 | 4.2e-18 | 64.6 | 8.0e-11 | 8.5e-08 | 32.1 |
| pfu_aug2.0_277.1_23790.t1 | 4 | 4 | zf-C2H2 | 313 | 337 | 2.4e-17 | 62.1 | 6.4e-08 | 6.8e-05 | 22.9 |
| pfu_aug2.0_277.1_23790.t1 | 4 | 4 | zf-C2H2_4 | 313 | 337 | 3.7e-13 | 48.7 | 3.1e-07 | 0.00033 | 20.7 |
| pfu_aug2.0_277.1_23790.t1 | 5 | 5 | zf-H2C2_2 | 329 | 337 | 4.2e-18 | 64.6 | 2.6 | 2800.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_277.1_23790.t1 | gi|524869214|ref|XP_005091403.1| | PREDICTED: transcriptional repressor protein YY1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_277.1_23790.t1 | gi|676451552|ref|XP_009052743.1| | hypothetical protein LOTGIDRAFT_64240, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_277.1_23790.t1 | gi|746835325|ref|XP_011068351.1| | PREDICTED: transcriptional repressor protein YY1-like isoform X2 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_277.1_23790.t1 | gi|759034472|ref|XP_011333980.1| | PREDICTED: transcriptional repressor protein YY1-like isoform X2 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_277.1_23790.t1 | gi|751236234|ref|XP_011171943.1| | PREDICTED: transcriptional repressor protein YY1-like isoform X2 [Solenopsis invicta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_277.1_23790.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_277.1_23790.t1 atggcgtcggttatcggttcggaagtagagattcaggaggtagaggtggaatctattccagtggaaatgccgatagagac agttgagacaacagatgaaactgtggaggttcaacctatgatagcattacaaccgcttccagacgcacaggaagaaattg ttttacaaacaagggaagaagtggttggtgatccgaacctcgtgtatgcggacactattccagttcctgcacctgaaata gaaatatgcacagaagaaacgccgacttttaacaaaaagaagggtggtaagaagaaaactgcacggtcgcgagggcttct cggggctggaactttgggagctgaatattcttttgatacaccgacgtcgacgaagaaatgggaacaaaaacaagttcaga tcaaaactttagaaggagaattctctgtgacaatgtgggcgacaggaggagatgacaaaactaaattagaggaagatgcg tcagtttcagagacagatgctgatttcacagaatacatgacggggaaaaaacttcccccagggggaattcctggccttga ccttagtgatcccaaacagttagcagaatttgctagtctccagcctcgcgatgttcagctgctgcagcactcaagaataa agcctcgtaagccagctgatgatgtgccaaggacggtaccctgtccccacaagggttgcaataaaatgtttagggacaac tcagccatgaggaaacatttacatacacatggacccagggtacatgtttgtgcggagtgcggcaaggcatttgtagaaag ctcaaaactcaaacgacatcaacttgttcacactggtgaaaagccttttcagtgtacgtttgagggatgcggtaagagat tttctctggactttaatcttagaactcatgtgcgtattcacactggagatcgaccatacgtttgcccatttgatggttgt aataagaagtttgcccagtcaacaaatctaaagtcacatatactgacacatgcaaaagcaaaaggtttgatggacccaaa tgatagttggtgtacagacgtagcatttggagatgtagatcaagaatcaagccacagcatttcaactgccttcagctcag gaggccatgttaataggatacacatacgaggagtcatagagaaattaattctgaaaaattttatttatggtttttggtgt gagtttgtacactcttcatctggattactgtgggaaactccagaagctcgtgtctga |
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Protein
| Protein ID | pfu_aug2.0_277.1_23790.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_277.1_23790.t1 MASVIGSEVEIQEVEVESIPVEMPIETVETTDETVEVQPMIALQPLPDAQEEIVLQTREEVVGDPNLVYADTIPVPAPEI EICTEETPTFNKKKGGKKKTARSRGLLGAGTLGAEYSFDTPTSTKKWEQKQVQIKTLEGEFSVTMWATGGDDKTKLEEDA SVSETDADFTEYMTGKKLPPGGIPGLDLSDPKQLAEFASLQPRDVQLLQHSRIKPRKPADDVPRTVPCPHKGCNKMFRDN SAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGC NKKFAQSTNLKSHILTHAKAKGLMDPNDSWCTDVAFGDVDQESSHSISTAFSSGGHVNRIHIRGVIEKLILKNFIYGFWC EFVHSSSGLLWETPEARV |
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