Gene
| Gene Model ID | pfu_aug2.0_277.1_23791 |
|---|---|
| Locus | scaffold277.1 : 49307 ... 82265 : - |
| To GenomeBrowser | scaffold277.1:49307..82265 |
| Genes list of scaffold | scaffold277.1 |
| Synonym | pfu_aug1.0_10257.1_31901 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_277.1_23791.t1 | 1 | 1 | Pacs-1 | 374 | 777 | 0.0 | 452.8 | 0.0 | 0.0 | 452.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_277.1_23791.t1 | gi|676492026|ref|XP_009065788.1| | hypothetical protein LOTGIDRAFT_169225 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_277.1_23791.t1 | gi|759042829|ref|XP_011330273.1| | PREDICTED: phosphofurin acidic cluster sorting protein 2 isoform X2 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_277.1_23791.t1 | gi|749774954|ref|XP_011142665.1| | PREDICTED: phosphofurin acidic cluster sorting protein 2 isoform X3 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_277.1_23791.t1 | gi|554847627|ref|XP_005934120.1| | PREDICTED: LOW QUALITY PROTEIN: phosphofurin acidic cluster sorting protein 2-like [Haplochromis burtoni] | 0.0 |
| pfu_aug2.0_277.1_23791.t1 | gi|634859685|ref|XP_007943147.1| | PREDICTED: LOW QUALITY PROTEIN: phosphofurin acidic cluster sorting protein 1 [Orycteropus afer afer] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_277.1_23791.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_277.1_23791.t1 atggcggacaaaccagccaaaacagtcgggccaggggcaagacctgtgcctatgaaactgtttgccgcctgggaactcga aaaaacggcaccaaattgtgtaccaagattatgcagctttcggttgtccagactgaagcttattaaaccggttgaaaatg atctcaatgcagtcatcatagctgtcaaaatgcagaatagtaagagagttttacggtccaatgagattttagtaccacca ggaggaatactagacactgaactggacctgtcgttctcgctacagtatgcccattacataaagagagactgtaataagtt acaagtgatgcttcaaagacggaaacgatacaggaaacaaaccatcctgggatataaaactcttgccattgacagatcac ctgacatagataacgagtcttacgacgaagacgatcaagaggactcatctaacgatgacatgatgagcgatagcgagcct gccatgttagacggtgaggggattccccatccacgtaaacaaagccgtagtaaaataagaggtcccgtctcagcaagggg aagggctttagactctgaggcagaccatgagctgggacactttgatacggtccctgaccccggtgatgacgactttgaat tagacgatatagaagatctcagcgacagcggacctgagatggatacagtcagtgttgtctctacaccaaaaccgagacta aaaccattctttcaagccatgtcagtgaatgtggaatcacaggacagcagtaaagaggtagacaaaattagtgatgatgg tagctccctaaaaaaggattcggacagtatcgctgaggtagacaaaattagtgatgatggtagctccctaaaaaaagact cggacagtatcgctgagttggatcctgagtccgccactccatctccacaaataaaagtacgtgcttcactgaccgcacct caggacaaggataaaattagtcgaggccgtagtcgatcatatcgagagaagaagaacttaaaagacgagaaaacaaaaat tctccgtcggcacagtgctgggcctgtgcatggatcggctccaattacgcaagaatgtttttcttttgctaatttgtcag tgttagtcaatacctcagaatggcaaggacagttgatggtacagaaattacaggagaagcaggttcagacaatatgtacg tgtggtgactccgatgtcaaagctacaatcagcgctctagtctcaaaaatacaaaaattttgtaacagtaattccaaagc tccagctcccattaaagttggtatagctggtggtgacagttatataaactcagtattacgaccctacgttgaccaattct ctgtcaaatcaccagattggcagagttacatcaaattcctatttattccttttggtaatagctgtattggacggtacctc ggctttgttgacgtaacatatagtactttatttcttgatccactttggaaggaaacttttgaaaagccagaaatctcaaa actagattctcaagaaatcgtgaatcgagtttcgaagtatttaagtggtgccacaggtgtaatgcaggtccctatagcag aagccatggtcatgtgtaaaagcaaaggaggtgaagaagaatctacgcagatatttattccattccttagtgaggtgaaa ataggaaatccagatcttatgaatgcttcaattgacatggaggacggtaacatgaccagtagtcagatggtgaattctcc atctttatctagctctccgccctcgtcattcctagataaaccaaagacagatgtatcaactcccccaagctcacctaatg tcagtctcaactccgctaattctagtcaaggacctctgtccaacatcactccaacactacctggggagtttatggaatta caggtagactactggacaatggccagcaaacctgacagtaccgaaaagtctgacaaagccagtaaaaaggatagcaacaa aattacgctgaaaactaccttcaaatccctgcatgtacaacgattggctcaatcgggtatgagttcagaattccctacta ctgtgttctccatggttgtagtaacaaaggagaagaaacagaaaataatgaggatagggaagaaggccaaggaaacagaa tccaagagtcaggtggtggagggaattaacagacttatatgtaccacgaaaagccaaaactatggattaaaagtatgtgt tgatggagtggaatggacaggtgtcaagtttttccagctttcatcgcagtggcagacgcatattaaacaattccccatcg ctatatttaacggccatgacccactctga |
|
Protein
| Protein ID | pfu_aug2.0_277.1_23791.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_277.1_23791.t1 MADKPAKTVGPGARPVPMKLFAAWELEKTAPNCVPRLCSFRLSRLKLIKPVENDLNAVIIAVKMQNSKRVLRSNEILVPP GGILDTELDLSFSLQYAHYIKRDCNKLQVMLQRRKRYRKQTILGYKTLAIDRSPDIDNESYDEDDQEDSSNDDMMSDSEP AMLDGEGIPHPRKQSRSKIRGPVSARGRALDSEADHELGHFDTVPDPGDDDFELDDIEDLSDSGPEMDTVSVVSTPKPRL KPFFQAMSVNVESQDSSKEVDKISDDGSSLKKDSDSIAEVDKISDDGSSLKKDSDSIAELDPESATPSPQIKVRASLTAP QDKDKISRGRSRSYREKKNLKDEKTKILRRHSAGPVHGSAPITQECFSFANLSVLVNTSEWQGQLMVQKLQEKQVQTICT CGDSDVKATISALVSKIQKFCNSNSKAPAPIKVGIAGGDSYINSVLRPYVDQFSVKSPDWQSYIKFLFIPFGNSCIGRYL GFVDVTYSTLFLDPLWKETFEKPEISKLDSQEIVNRVSKYLSGATGVMQVPIAEAMVMCKSKGGEEESTQIFIPFLSEVK IGNPDLMNASIDMEDGNMTSSQMVNSPSLSSSPPSSFLDKPKTDVSTPPSSPNVSLNSANSSQGPLSNITPTLPGEFMEL QVDYWTMASKPDSTEKSDKASKKDSNKITLKTTFKSLHVQRLAQSGMSSEFPTTVFSMVVVTKEKKQKIMRIGKKAKETE SKSQVVEGINRLICTTKSQNYGLKVCVDGVEWTGVKFFQLSSQWQTHIKQFPIAIFNGHDPL |
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