Gene
| Gene Model ID | pfu_aug2.0_277.1_23798 |
|---|---|
| Locus | scaffold277.1 : 333473 ... 337305 : - |
| To GenomeBrowser | scaffold277.1:333473..337305 |
| Genes list of scaffold | scaffold277.1 |
| Synonym | pfu_aug1.0_10514.1_24752 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| beta- -galactosyltransferase 1 | GO:0016757 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_277.1_23798.t1 | 1 | 1 | Galactosyl_T | 181 | 368 | 4.39994e-41 | 140.6 | 9.80909e-45 | 7.20001e-41 | 139.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_277.1_23798.t1 | gi|260795873|ref|XP_002592929.1| | hypothetical protein BRAFLDRAFT_201989 [Branchiostoma floridae] | 8.00141e-43 |
| pfu_aug2.0_277.1_23798.t1 | gi|512866032|ref|XP_004917762.1| | PREDICTED: beta-1,3-galactosyltransferase 1 [Xenopus (Silurana) tropicalis] | 8.00001e-42 |
| pfu_aug2.0_277.1_23798.t1 | gi|260795871|ref|XP_002592928.1| | hypothetical protein BRAFLDRAFT_65516 [Branchiostoma floridae] | 1.99993e-41 |
| pfu_aug2.0_277.1_23798.t1 | gi|597770238|ref|XP_007248918.1| | PREDICTED: beta-1,3-galactosyltransferase 1-like [Astyanax mexicanus] | 3.00004e-41 |
| pfu_aug2.0_277.1_23798.t1 | gi|543348933|ref|XP_005519822.1| | PREDICTED: beta-1,3-galactosyltransferase 1 [Pseudopodoces humilis] | 3.00004e-41 |
Transcript
| Transcript ID | pfu_aug2.0_277.1_23798.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_277.1_23798.t1 atgcgtctacctcggacaaaaagaacacgaattgcggtttttatttttttgattaccattgctgcagtttccatctttta tctcaattctgcatccctccagaaaaacggacctaaagcctacgtttctgatttctacctaaagtttatagggaaaactg ttgatatgaaaagaaaacatgaatatagacgtggggatgcgtcaacaagacaactcacttcctatggcttgttaagtagt ttcaaaaggctgtctttagcctttcctacgactcaaaataagacagcagcatattcgaaaacaccaaagaaaacagaatt aaaggtttcatctaaatattggtgtgaccaactagaaaatgaataccctttagtgctgaactttacaaagctaatgattc aaggggacagggagtttaaaaacataaaaccaattcacgagcacccttttcattatatcttcaatgcatccagcgcatgc acagcaggtgataaaattaaggttgtatgcgttgtcaagtccgcctataacaattttgaaatgagagaaattataaggaa gacatgggcaaaagacgccaaagaagacggttccaaagttctgtttgcactaggttattcaaataatcaaagttttcagg agaaaattcgtgaagaaaacagaatatacatggatattatacaagagaatttcatagacagttacaataacaacacattg aaaaccgttatgcaaatcaggtggatttccaagttctgctcaaatgctatttatgttttcatggtggatgatgacgtcat agttaattatagaaacctaattcactactttgataatgttaacccagctgacagaaatgctttgtattccggaaatctta aaattcacgaaaagcctatgagacattcaaagagatggtatgcttcggaagaaatgtacccttacacatgttatccccct ttcttgtccgggggtgctatattgacaagcacagaggtaattcggaagatgagtatcgcgataccctacgtgaagagctt cagactggatgatgtgtatctgggtattttacttcagaagctgggaatttcgcctcaaaagaatacaaaaattcttatga tacatgatcagtacggaagaataataagtaacagcagtgacttcattgccagacacgtattccagttcccaaagaaatat cttgaaatgtaccagagcttagtaagaaataaataa |
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Protein
| Protein ID | pfu_aug2.0_277.1_23798.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_277.1_23798.t1 MRLPRTKRTRIAVFIFLITIAAVSIFYLNSASLQKNGPKAYVSDFYLKFIGKTVDMKRKHEYRRGDASTRQLTSYGLLSS FKRLSLAFPTTQNKTAAYSKTPKKTELKVSSKYWCDQLENEYPLVLNFTKLMIQGDREFKNIKPIHEHPFHYIFNASSAC TAGDKIKVVCVVKSAYNNFEMREIIRKTWAKDAKEDGSKVLFALGYSNNQSFQEKIREENRIYMDIIQENFIDSYNNNTL KTVMQIRWISKFCSNAIYVFMVDDDVIVNYRNLIHYFDNVNPADRNALYSGNLKIHEKPMRHSKRWYASEEMYPYTCYPP FLSGGAILTSTEVIRKMSIAIPYVKSFRLDDVYLGILLQKLGISPQKNTKILMIHDQYGRIISNSSDFIARHVFQFPKKY LEMYQSLVRNK |
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