Gene
| Gene Model ID | pfu_aug2.0_277.1_23799 |
|---|---|
| Locus | scaffold277.1 : 343501 ... 354375 : - |
| To GenomeBrowser | scaffold277.1:343501..354375 |
| Genes list of scaffold | scaffold277.1 |
| Synonym | pfu_aug1.0_2688.1_30219 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_277.1_23799.t1 | 1 | 1 | Galactosyl_T | 159 | 330 | 5.6e-36 | 123.9 | 1.1e-39 | 7.9e-36 | 123.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_277.1_23799.t1 | gi|260825335|ref|XP_002607622.1| | hypothetical protein BRAFLDRAFT_84689 [Branchiostoma floridae] | 1.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_277.1_23799.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_277.1_23799.t1 atgatcatgcgtctacctcggcggccaaaacgattaagacatgcggatagaacaggaaccaaagcaaacaaacaaaaacc tccaccacataaaaagaagcgaactaacaatatgggagtgacaccaggtgcccaggaagggtcagcatctcctgcttaca ttcaacatccgtcgcttcaattcggtagaattgccacatctggtttcttccatttcggaagatataagtatattatgttg ttggatggttcaaatggtcttagacagaatattatccaccattctggggcctcaacaacaagtactggtcgcattaggga aatgatcatgcgtctacctcggcggccaaaaagattaagacacgcggtttttatttttgcgatttccattgctgcattct ccatcttttatctcaatgttgaatccctccacagaaaaggaccaaaagtctacnggataaaagacgcgaaagaggacgga tccaaagttctgtttgccctgggttactcaaataatcaaggtattcaggaaaaaatacgaaaagaaaatgaaaaatatat ggatatcatacaagagaattttctggaccattacaacaacaatactttgaaaactgttatgcaaattcgatggatttcta agttctgttccaatgctatttatgttttcatggtggatgatgacgtcatagttaattatagaaacttaattcactacttt gataatgttaaccaatctaaaagaaatgctttatattcaggaaatcttaaagtaaacgaaaaacctatgagagatccaaa gggatggtatgtgtcggaagaaatgttcccttacacgtgctatcccccttttgtgtccgggggagctatattgacaagca cagaggtaattcggaagatgagtatcgctgtgccttacgtgaagagctttaaatttgacgatgtgtatttgggtattcta gttcagaaactgggaatttggcctcaaaagaatacgaaagttcttatgatacaggcccagtatgggagatacgacaacag tgacctcattgccagacatggattcaaggacccaatgaaatatcttgaattgtatcatagcatagtagggttgaaataa |
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Protein
| Protein ID | pfu_aug2.0_277.1_23799.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_277.1_23799.t1 MIMRLPRRPKRLRHADRTGTKANKQKPPPHKKKRTNNMGVTPGAQEGSASPAYIQHPSLQFGRIATSGFFHFGRYKYIML LDGSNGLRQNIIHHSGASTTSTGRIREMIMRLPRRPKRLRHAVFIFAISIAAFSIFYLNVESLHRKGPKVYXIKDAKEDG SKVLFALGYSNNQGIQEKIRKENEKYMDIIQENFLDHYNNNTLKTVMQIRWISKFCSNAIYVFMVDDDVIVNYRNLIHYF DNVNQSKRNALYSGNLKVNEKPMRDPKGWYVSEEMFPYTCYPPFVSGGAILTSTEVIRKMSIAVPYVKSFKFDDVYLGIL VQKLGIWPQKNTKVLMIQAQYGRYDNSDLIARHGFKDPMKYLELYHSIVGLK |
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