Gene
| Gene Model ID | pfu_aug2.0_277.1_23800 |
|---|---|
| Locus | scaffold277.1 : 356416 ... 384816 : + |
| To GenomeBrowser | scaffold277.1:356416..384816 |
| Genes list of scaffold | scaffold277.1 |
| Synonym | pfu_aug1.0_2688.1_30217 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_277.1_23800.t1 | 4 | 1 | I-set | 2 | 86 | 0.0 | 202.5 | 6.3e-22 | 1.3e-18 | 66.5 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 1 | Ig_2 | 3 | 81 | 3.2e-26 | 91.2 | 1.6e-12 | 3.4e-09 | 36.6 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 1 | V-set | 4 | 75 | 5.4e-09 | 35.9 | 7.4e-07 | 0.0016 | 18.3 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 1 | ig | 10 | 71 | 6.8e-06 | 26.1 | 5.5e-07 | 0.0012 | 18.9 |
| pfu_aug2.0_277.1_23800.t1 | 2 | 1 | Ig_3 | 14 | 73 | 2.8e-11 | 43.7 | 2.3e-10 | 4.8e-07 | 30.1 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 2 | I-set | 1220 | 1303 | 0.0 | 202.5 | 7.0e-14 | 1.5e-10 | 40.7 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 2 | Ig_2 | 1223 | 1300 | 3.2e-26 | 91.2 | 3.3e-05 | 0.069 | 13.2 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 2 | V-set | 1258 | 1300 | 5.4e-09 | 35.9 | 0.014 | 29.0 | 4.5 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 2 | ig | 1278 | 1290 | 6.8e-06 | 26.1 | 1.2 | 2600.0 | -1.4 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 3 | I-set | 1338 | 1421 | 0.0 | 202.5 | 3.1e-13 | 6.6e-10 | 38.7 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 3 | Ig_2 | 1348 | 1418 | 3.2e-26 | 91.2 | 0.00054 | 1.1 | 9.3 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 3 | V-set | 1379 | 1418 | 5.4e-09 | 35.9 | 0.014 | 29.0 | 4.6 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 3 | ig | 1396 | 1409 | 6.8e-06 | 26.1 | 0.33 | 690.0 | 0.4 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 4 | I-set | 1456 | 1543 | 0.0 | 202.5 | 1.0e-16 | 2.2e-13 | 49.8 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 4 | Ig_2 | 1466 | 1539 | 3.2e-26 | 91.2 | 3.7e-09 | 7.8e-06 | 25.9 |
| pfu_aug2.0_277.1_23800.t1 | 2 | 2 | Ig_3 | 1479 | 1532 | 2.8e-11 | 43.7 | 0.00047 | 0.99 | 9.9 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 4 | ig | 1482 | 1529 | 6.8e-06 | 26.1 | 0.12 | 250.0 | 1.8 |
| pfu_aug2.0_277.1_23800.t1 | 4 | 4 | V-set | 1504 | 1511 | 5.4e-09 | 35.9 | 0.22 | 470.0 | 0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_277.1_23800.t1 | gi|524913832|ref|XP_005111740.1| | PREDICTED: titin-like [Aplysia californica] | 8.0e-26 |
| pfu_aug2.0_277.1_23800.t1 | gi|591364447|ref|XP_007057123.1| | PREDICTED: myosin light chain kinase, smooth muscle-like [Chelonia mydas] | 2.0e-22 |
| pfu_aug2.0_277.1_23800.t1 | gi|558227420|ref|XP_006137739.1| | PREDICTED: myosin light chain kinase, smooth muscle isoform X1 [Pelodiscus sinensis] | 2.0e-22 |
| pfu_aug2.0_277.1_23800.t1 | gi|683905897|ref|XP_009086078.1| | PREDICTED: myosin light chain kinase, smooth muscle [Serinus canaria] | 2.0e-22 |
| pfu_aug2.0_277.1_23800.t1 | gi|543743067|ref|XP_005512377.1| | PREDICTED: myosin light chain kinase, smooth muscle isoform X1 [Columba livia] | 4.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_277.1_23800.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_277.1_23800.t1 atgccagagcagactaaggcgcctctgggtggcagtaagaggtttgaatgccgagtggtaggtttccccagacctaccgt tcaatggttcaaggacggcagggacatcacccatgacgaccgattcgagttcgactactccattgacggggtcattacca tggtgattcataatgtgacatttaaggaccaaggagtatatagctgtagagctgagaattcagagggatgggcagcaact gccgccatattaaatgttcgagccattcaagaatacattgaaaaggataccgtccatgagatgcaatttgaaattggagg aatgaaacaggactcttctgagataaacgaatgctctggtcaactgaaaatcaaaactcgttatgacgacttcatctcga aaattggcgggaaaggctccattcatgacagcatgaggtctgattttgatatcaatggcgacagtaacatcaccgatagt aaggctcactcatggaagatggatacgaccactaacgtgaacaatgtttctgatgatactgatacaggttccaaaggcat tcttcgagaagagcaagaagagtcaaaggcaaaggacaaagacaacatgttgaggccttctgctaagcgacgactctcag atctcgatgtccatctgagaatgatgaatgagaaggttgcgccattctttgaccattctttggaagaggaacgaataaat gaggagaaaaatttatcacccatgcaccacgataagaaccatcaaattacggagtcagagaaaacagtaggcaaagacat ggaaagaaaaatgaactatgcctcaacagtagaaaccgatttgattgataaagataattacttgaaggccgtcgcaaata tagggcaagaaggtaagtcgatgtcaaaccttgagacatccatagaaatagaacaagatgtgaatgccaaaaataagaaa aacttgaaagagcctgacttgcaaaacaaaaatggcgacactgaggaagcaggtgaagaggatgagatagcagatcagct catggatttcttgaatgtggacagaaagaggtcacgaagatctacgacaactgatagcggccttggagatgatgattaca gagattcgtcaccagaaagcgatgatttagatggagatctgaaagacggcgatggaaaaagacgatcaagcaaagacgga cataaacacaagaagaaaggatacagaccatctagcagacaaatatctaaggaagatgataagccagaggaaccttcaag catggataagaaagtcctcaaggatgcagataaacctaaaaaagaaccaaaagaaccagtgcatgtaaaagacgatggag acaaaaacaagaaatctctgcaagataatgaacagaaaacaaacactgaaactgatgggaaagcagacaaaatttatgat agccaaaatcaaaaagaaaaggttgatgatagtttgatagagaatgcatctaccgcgaaaaaagacaagcaacaaaagaa aatggctgtgcctaaaataatgatcgacgaaatagattcccttgatgatgatgaggaggataatctccaacgagaagaca tgggtagggattcaaaaactagtcacggtgtagaagatgcaccgaaaggaactccagagttagctcacgaatctacagtt caattcaaagaatatgtttctgtaaatgccaacgacgaagagtgctttgtggacgaattttcagtcgttatgtccgcgga tacgaatcaggaatatactcgtgacttaaaagcaaaagcggagtcagaagttgaatctcccgatgtttctaagaataact ggtcacttaaaaccgagtcagatttacatgagtcaatggaaaatgaacaaatgacattaacacctaacattgaggttcaa actgatagtcagatgctgaatgaagaacctgagaattcacatgtcacccatgatgacgacgcgtcatccgaagcctctac cagggtgcaactggaaggtatagtcgtgaaagacgatgaaattgaaaataacaacgatagcaatttagtgtcggcaaatg cactcaagaaagctaggcaaagtaccccagatgagagtgacgcaaatttgaagcctaagattaaagacagagatgagcag gccaaaaagaaggaagaggaacttgatgattcaaaacaagagaaggccaaaaggaaggaagaaacacctgatatttcaac caaactcaacatgatgtcatttgattcagggattgataatgagagtatcgtatctgagcaatcgactgcagtatctgaaa caccattatcaacctctgctgaaagtgctcagaaccgacaagatgaagtacaaaaagataacaacaaagaaccaatcaat aaagaatatttacaaaacctcagaaacgaaaagaaacaactcaatctaaaaacagaggaaacagaaatccgcgatgataa tgtcgacgataagattcatatagaaaatgagaaaaatgaaagaaaggcaactcttcgtaaacagcacatggtcatcgaat cagacgaagacgaggatgacaccagaagcagatccttgtcgattcatgatgatgactactttgcaagtacggaatcccta ggtatggggatgtctcgggaaagtcttgctttctctcagctggaccttttctgtgcggagactattcctgaaaaagacga aaacttgtcacggtcatcctccaaagatgctgaggccatggaagaggacgactttgtagatcaagagctcaagcagcaag ctattctggatgctctgaagcaaagcgaatattcagaggatattgacagttcagagctactatcctctgatccagaagac tatggattgaaattggcaaagcatgcgagagaaatatcagaagaaatgtcatcgataaatcaagcttggagcgaaacaac atcttacacggaatacacagagtcttcgttttggaccacagacgttgacggcatctctatggatggagtaccaactatgg aaccagtttctgctaaccaaattaatgatacgcaagcagtacgagatgttagtgttgttgacaagaaacaagacaatgtc aaagaagttgaggccaagaaaacagatgcgccttcaatactgaagagtgaaggccaaatgaaaatttccgcggaaggaac tgagggaaatagttccattagtgaggataaacagccattagcaaatgaacccttcgataaaaaggaagcagacgattcat atcggaaacccggtaaggttgaaaagatcccaagtgttgaagatgatgacaaaggtcgtcaggaaacagaccttacaaat aaaagaccaagtaaaagaaatgagagcagcaattcaaacgatcaagacttacacatttctgggtcgattccaacaatcga ggacaaaatagaaggtaaaaaggctgacatttctgagagagaacatccttgtcatcaaatctcaagtgacattaagcagt cagtggggccagttgaagaaacgccgttaaagatggaagcaattgcaaatgtaaaaagcaaaccaaaagatacatcagac gagttggcacttgacgtcacaactgatatttcttcaaagcagaaacctcttagtcccccaaggatcctcagagcaacttc agatgttcgaattgaaaacggcgaaagcattgttcttgaatggaaaatatccggtaacccagtacctgacataaagatgt ttaaagacggtaaaccagtcaatttttgtgatggagaaaacattttcaaagaggacgagtacgttgccatggagatacta gacgcgacaaccaaggattccggttgctatgagatacacctgacaaattcccttgggactgatataggaatgataaatgt aatggtgaaggatagccgtagttcgagtccaaaggatggggctttggagcagaaagaaaaagaaagtttaccagagatgt ttgcctatccacctgaattctcagtggcgccatctgactgtgtcatacaggacggacggacagtcatcatcaaaggctgc gtaaagggtaacccagtacctgacataaagatgtttaaagacggtaaaccagtcaatttttgtgatggacaaaacatttt caaagaggacgagtacgttgccatggagatactagacgcgacaaccaatgattccggttgctatgagatacacctgacaa attcccttgggactgatataggaatgataaatgtaatggtgaaggatagccggagttcgagtccaaagggtggggctttg gagcagaaagaaaaagaaagtttaccagagatgttcgcctatccacctgaattctcagtggcgccatctgactgtgtcat acaggacggacggacagtcatcatcaaaggctgtgtaaagggaaatcccccacctagagtccaatggttccgtggtgagc gtcagatcagtggggatggagatcttgacatcattgacgagggatcgtatagctgcctggtcattccgtgcccgacagca gagcatgctgggaaatactcatgccgagctgtcaatgacttgggtgtggctgagacacattttaatctcatttatagagg tcaagatttacatgtacaagcagatgaagaggaagaaaaacaagttaacaagaagaaaagggccaagttacagagacagg aatgtgtaccctcagcaccaaatgtacagcttgaaatatcagagtcacagggaattatgccacagaagtttaccctcctt aaagattttgtggataaagctaatgacacagaagtacacaaaggagaggttgtagaagtactggacaagatagatggtga ccactggctagtcaggaccggtcaagctggaaatcag |
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Protein
| Protein ID | pfu_aug2.0_277.1_23800.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_277.1_23800.t1 MPEQTKAPLGGSKRFECRVVGFPRPTVQWFKDGRDITHDDRFEFDYSIDGVITMVIHNVTFKDQGVYSCRAENSEGWAAT AAILNVRAIQEYIEKDTVHEMQFEIGGMKQDSSEINECSGQLKIKTRYDDFISKIGGKGSIHDSMRSDFDINGDSNITDS KAHSWKMDTTTNVNNVSDDTDTGSKGILREEQEESKAKDKDNMLRPSAKRRLSDLDVHLRMMNEKVAPFFDHSLEEERIN EEKNLSPMHHDKNHQITESEKTVGKDMERKMNYASTVETDLIDKDNYLKAVANIGQEGKSMSNLETSIEIEQDVNAKNKK NLKEPDLQNKNGDTEEAGEEDEIADQLMDFLNVDRKRSRRSTTTDSGLGDDDYRDSSPESDDLDGDLKDGDGKRRSSKDG HKHKKKGYRPSSRQISKEDDKPEEPSSMDKKVLKDADKPKKEPKEPVHVKDDGDKNKKSLQDNEQKTNTETDGKADKIYD SQNQKEKVDDSLIENASTAKKDKQQKKMAVPKIMIDEIDSLDDDEEDNLQREDMGRDSKTSHGVEDAPKGTPELAHESTV QFKEYVSVNANDEECFVDEFSVVMSADTNQEYTRDLKAKAESEVESPDVSKNNWSLKTESDLHESMENEQMTLTPNIEVQ TDSQMLNEEPENSHVTHDDDASSEASTRVQLEGIVVKDDEIENNNDSNLVSANALKKARQSTPDESDANLKPKIKDRDEQ AKKKEEELDDSKQEKAKRKEETPDISTKLNMMSFDSGIDNESIVSEQSTAVSETPLSTSAESAQNRQDEVQKDNNKEPIN KEYLQNLRNEKKQLNLKTEETEIRDDNVDDKIHIENEKNERKATLRKQHMVIESDEDEDDTRSRSLSIHDDDYFASTESL GMGMSRESLAFSQLDLFCAETIPEKDENLSRSSSKDAEAMEEDDFVDQELKQQAILDALKQSEYSEDIDSSELLSSDPED YGLKLAKHAREISEEMSSINQAWSETTSYTEYTESSFWTTDVDGISMDGVPTMEPVSANQINDTQAVRDVSVVDKKQDNV KEVEAKKTDAPSILKSEGQMKISAEGTEGNSSISEDKQPLANEPFDKKEADDSYRKPGKVEKIPSVEDDDKGRQETDLTN KRPSKRNESSNSNDQDLHISGSIPTIEDKIEGKKADISEREHPCHQISSDIKQSVGPVEETPLKMEAIANVKSKPKDTSD ELALDVTTDISSKQKPLSPPRILRATSDVRIENGESIVLEWKISGNPVPDIKMFKDGKPVNFCDGENIFKEDEYVAMEIL DATTKDSGCYEIHLTNSLGTDIGMINVMVKDSRSSSPKDGALEQKEKESLPEMFAYPPEFSVAPSDCVIQDGRTVIIKGC VKGNPVPDIKMFKDGKPVNFCDGQNIFKEDEYVAMEILDATTNDSGCYEIHLTNSLGTDIGMINVMVKDSRSSSPKGGAL EQKEKESLPEMFAYPPEFSVAPSDCVIQDGRTVIIKGCVKGNPPPRVQWFRGERQISGDGDLDIIDEGSYSCLVIPCPTA EHAGKYSCRAVNDLGVAETHFNLIYRGQDLHVQADEEEEKQVNKKKRAKLQRQECVPSAPNVQLEISESQGIMPQKFTLL KDFVDKANDTEVHKGEVVEVLDKIDGDHWLVRTGQAGNQ |
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