Gene
| Gene Model ID | pfu_aug2.0_2775.1_18915 |
|---|---|
| Locus | scaffold2775.1 : 45286 ... 63076 : + |
| To GenomeBrowser | scaffold2775.1:45286..63076 |
| Genes list of scaffold | scaffold2775.1 |
| Synonym | pfu_aug1.0_9933.1_68118 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2775.1_18915.t1 | 1 | 1 | CHAT | 7 | 195 | 5.9e-30 | 104.3 | 1.4e-33 | 1.0e-29 | 103.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2775.1_18915.t1 | gi|390346063|ref|XP_003726469.1| | PREDICTED: tetratricopeptide repeat protein 28 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_2775.1_18915.t1 | gi|632964777|ref|XP_007898562.1| | PREDICTED: tetratricopeptide repeat protein 28-like [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2775.1_18915.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2775.1_18915.t1 atgctgcatggatcggaatggaagccaaacgtgaatgatatgccgagtgccaaacgggaactgcaatccgtggctagcta cctcagtacagatgtacttagtcgtcaggatgccactaaagaccgttttatcgaggaggcaccaaaagccaccgtcattc atttagcaacatacggatgctggaaggagggtctcatagcctgtacacctaacagtgattcaacaacggagaactcactg ttaccttcatcctacgtcatcacggctagcgatattctgtctctgaaactcacggcacaagttgtcgtgctcagtatggg gtacggccccaacaggattaacgagtacattgataacatgtacagactgccgtcagctttcttagaggctggcgtacagt gtgttctgacatgtatgtggccagtgcctgacctagccgtagagaagttctactttcacttttatcataagcttcagacg ggggcgatggtgacagacgccataagggtcggtgtgcggaaagtcagggaggatgacaggtttaaggacccctatttttg gagcggttggattctggtcggtaaggacatccatgtaaacgtctgtcagatacgtcactcgctgctggaccagaaactgg acaacatggagaaagccgtagaggaaaatagcaggaaaaacttcctaaatcctaagacttcactcactacagtcccatca agggaagagaacttggagtcactacagaagattttgggacagctcttacatcatcatacatcacaacccagtgttgtgcc ttcactcatagatctgcttgacagttctctgaagcgacttcacacggaggagaataaccgtcagacgtccatattaccga tggcgattgtccagagtcgtggagggttgaacctactacgacatctcggcttccacttccaggccaaaggagcgatggtc gattctccgtacgtggtgtatccacactggaacaacgacgatttacttatacctacatttgacgcactacgtgctgtcct agttatgtataacaaagcatgctgcagacattcagttaaagacgacagatctgtctgtacgtccactgtggcagaacata aaaataagacggatgctaactgctgtgggattccatcagattggtttactactcaacttcaacaaaactccggagaaaaa gcatcatttcacacagatacagggaaactcccgactctggcaccaatcatcttgcccagaaatcagctgaggatgagtac accatggttaagtcgggcggaaaaagcagacgaaatggatgagaaagttcaactagccagaagcaagtctgacctagatg acaagttcaaaggtcatttagatcgagctaaaacttggcaccaggtcacagtagctgctcaggcaaacgagtcccttgac aaatacggccgtcctaaatccacccctccaaaggttaaggtcataggaggctcaaccgcctctcggaatagaatcccaat caagagggagccactgttagtcataccagaagtggatcagaggagagattacgctaacttcgtcttgcaacaaagaatcg aaaatattgacgtacgacacaagaatgaaatcatgaaattgtacctaccttatatacaaggggcacataactga |
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Protein
| Protein ID | pfu_aug2.0_2775.1_18915.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2775.1_18915.t1 MLHGSEWKPNVNDMPSAKRELQSVASYLSTDVLSRQDATKDRFIEEAPKATVIHLATYGCWKEGLIACTPNSDSTTENSL LPSSYVITASDILSLKLTAQVVVLSMGYGPNRINEYIDNMYRLPSAFLEAGVQCVLTCMWPVPDLAVEKFYFHFYHKLQT GAMVTDAIRVGVRKVREDDRFKDPYFWSGWILVGKDIHVNVCQIRHSLLDQKLDNMEKAVEENSRKNFLNPKTSLTTVPS REENLESLQKILGQLLHHHTSQPSVVPSLIDLLDSSLKRLHTEENNRQTSILPMAIVQSRGGLNLLRHLGFHFQAKGAMV DSPYVVYPHWNNDDLLIPTFDALRAVLVMYNKACCRHSVKDDRSVCTSTVAEHKNKTDANCCGIPSDWFTTQLQQNSGEK ASFHTDTGKLPTLAPIILPRNQLRMSTPWLSRAEKADEMDEKVQLARSKSDLDDKFKGHLDRAKTWHQVTVAAQANESLD KYGRPKSTPPKVKVIGGSTASRNRIPIKREPLLVIPEVDQRRDYANFVLQQRIENIDVRHKNEIMKLYLPYIQGAHN |
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