Gene
| Gene Model ID | pfu_aug2.0_278.1_27148 |
|---|---|
| Locus | scaffold278.1 : 54606 ... 61086 : + |
| To GenomeBrowser | scaffold278.1:54606..61086 |
| Genes list of scaffold | scaffold278.1 |
| Synonym | pfu_aug1.0_23314.1_18929 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_278.1_27148.t1 | 2 | 1 | TMEM138 | 10 | 22 | 0.0 | 168.3 | 0.2 | 1400.0 | -0.5 |
| pfu_aug2.0_278.1_27148.t1 | 2 | 2 | TMEM138 | 37 | 157 | 0.0 | 168.3 | 0.0 | 0.0 | 168.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_278.1_27148.t1 | gi|676487683|ref|XP_009064376.1| | hypothetical protein LOTGIDRAFT_221710 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_278.1_27148.t1 | gi|524869425|ref|XP_005091506.1| | PREDICTED: transmembrane protein 138-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_278.1_27148.t1 | gi|260837171|ref|XP_002613579.1| | hypothetical protein BRAFLDRAFT_277366 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_278.1_27148.t1 | gi|156351265|ref|XP_001622434.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_278.1_27148.t1 | gi|390360669|ref|XP_001185328.2| | PREDICTED: transmembrane protein 138 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_278.1_27148.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_278.1_27148.t1 atgcttgttgaaagatacagacccatcttgttcatccaatattttcttctgcttgtggacttgtttatgaacacatgtat tgaacttctgaggtttcaaaatgtgtatctcttagtgctgtttgtaatccaagatgtctgtatcatctttgctgtcatag tagtgttcttactattcttcaatacttacattttccaagcaggacttgttaatattcttattgagaaattcaaagtgcca attgctataaccttcatatactttggattaaatgttggacttcatgtatgggaaatgacattacgatgggatgaaccaga tcgttatatttgggatacaactggattcatcccgctatatgtgattcaacgtacaggtgctgttttgtattactactttt ataagaggactgctctgaaactaggagatcctagattttaccaggattctgactggatacggagagaatttgagaaaaga agataa |
|
Protein
| Protein ID | pfu_aug2.0_278.1_27148.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_278.1_27148.t1 MLVERYRPILFIQYFLLLVDLFMNTCIELLRFQNVYLLVLFVIQDVCIIFAVIVVFLLFFNTYIFQAGLVNILIEKFKVP IAITFIYFGLNVGLHVWEMTLRWDEPDRYIWDTTGFIPLYVIQRTGAVLYYYFYKRTALKLGDPRFYQDSDWIRREFEKR R |
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