Gene
| Gene Model ID | pfu_aug2.0_278.1_27154 |
|---|---|
| Locus | scaffold278.1 : 315341 ... 326319 : - |
| To GenomeBrowser | scaffold278.1:315341..326319 |
| Genes list of scaffold | scaffold278.1 |
| Synonym | pfu_aug1.0_9784.1_46101 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_278.1_27154.t1 | 2 | 1 | Mab-21 | 103 | 137 | 2.1e-34 | 119.0 | 0.47 | 3500.0 | -3.2 |
| pfu_aug2.0_278.1_27154.t1 | 2 | 2 | Mab-21 | 170 | 347 | 2.1e-34 | 119.0 | 3.5e-38 | 2.6e-34 | 118.7 |
| pfu_aug2.0_278.1_27154.t1 | 2 | 1 | VWA | 643 | 805 | 1.9e-18 | 66.8 | 1.3e-16 | 1.0e-12 | 48.1 |
| pfu_aug2.0_278.1_27154.t1 | 2 | 2 | VWA | 852 | 1001 | 1.9e-18 | 66.8 | 4.8e-08 | 0.00036 | 20.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_278.1_27154.t1 | gi|676439913|ref|XP_009049005.1| | hypothetical protein LOTGIDRAFT_238606 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_278.1_27154.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_278.1_27154.t1 atggctgcagcatatccaaccgacgagcaaactgtaatttccagaggactgtacagattagttagtgatatcattgggcc agaatgtatcgttcacttacgacgacaaaagaatgacatcagagatttattcatgggctgtgatacatcaaaatctagca agacagtgacaagtggaagtcgagcagagggattcttattcaaatcatcagatgctgatataatagacattgacagtaat attgttgtcgtaaaaagtaatacgtggcacttatcaaacacaagggactttcccaatattcttctcatggaaactgatat tgttcctccaggatttgcgttgcttaaatatttaaaatacgatgacagagacaaacaattatacaaatcacttgtgcgtc gaggaaacgatctctatgttagtagccgaatagctagagaatcatgtgccatcgacggtgtttcatacactcatggccca tgtaacagtggtggaatgattggagatgaatacgacatagcctatactttgaaatgtccattttggccgaatcaggcaaa gtcatttattttacgatcacttcgtcacggctggccatcgttcgatgtaatgaaggacatttgtgaagaaggatgccact ttgttcctatcaacagtagagtacatgcgcacagcgaatcggccgatctggaatggaggatatcaaccgtccgggccgag aagaaattggtatattcaatgaaccattgtcagtttctatgttatggactgatgaaaataattttgaatgaagttttaaa gaaggatccggagactggagaacttttgtgttcgtacttcatgaaaacggctgtattttgggaaatgtcagagcataaag aggattggtctccattgaatttcatttgtaaattctggaatgtctttcgtcggattattaaatgggtctccactggatat tgtccaaactttttcattcctcagcataatatgtttcttggaaaagtctttgggcgccaccagagggatttaatgacaag actacgcaaactccatgacgaagggtatcagtttctcctacgctgtccttcgttgaacaaaaaattgactacaatcataa accagcccttgaaggccagaaggataataacaaatgagaaagattatgtaaaacggacggaaatcgaagcaatgagaatg aagcttatcattgcatcatcgatgatagattggccgacggaaaccggtcagatgataaaggtattgagcaatactgttgt cctgacagcttcatctaatgacatgacatcttcattaagactgaatactcacaacatactgcagagaatcgccgtaatgt tatttttaacaaatgacacacaacatcgaagtctttcgaacaaacagaggtcatggtacatcaatattgctaaatcaatt ctgagaaagacaaaatctttcttttgtttggaaaagctcttccatgccgtttgtatgtataggagcggaaattaccataa aacaatagacataattcatctgataaaagaaagacttcagagccaacagtataaatatacatggaatcttgatggcaata ctgtatacgaatgcaaagagaaaggaatgacatatttggaaatattgaaaaagcttgtcgtcagctcttacacctttgaa tctgaactatcagttgaggaactgaagttggaaagtagcgctagcgaagaaaccattggatgtgaagtgctattcatacc accactactgcagtatcttggtacgctgagtaaaccaacagatcttggtgatagtaccagcagcttacagatttatccaa aagttttgtcatcaaccacaacaaaaactgacgttttactgaaatcttcagaattattcccgaaaggatgcagcaataaa ccagcagatgttgttttcttgttcgacacatcatccggtgtttccacaagccaattagacgctcaaacatcctacgcccg cgatctccagaaactgttttacacaggtcgtaatactacagtgttgactgctgcagtctacgggagtcggacaaatgatg ttccatctcctcagaatgacgctaataaagggttaccactaaaaatgctaagtttttctagcgttggcgggaagcgcaat ctcacttcagtcatgaactttattgaattgttttctagaaaacaagctagacgacacacgggacatgttgctattttgtt tatttctggaagttatggcgttgttgacgataccatcgctcgagctaattacattcggagaacgctgggaatttacatct atgtcataaaagtaggaaattttgtgggaaagtctgacgtaacgaaaattgcatcgtctccttctaggaagtttgttttc catgtgacgaattctggaattacagcgtccctcaaagaacttctcaacatacatttatgcgatgtccagatccatccaag attaacaacaaaagctataccaaaatgtgttgctaagcggccagttgacgtcattttttctcttgacgaagttagcattg gtgcacgtcattcacagataataatctaccttatagaagcactagtgtcgggattcgattcgtacagaaataacatcaat attgctctcgtaaatagtaaaaatatcaattttgcaaagtttgggaggaaatttaaaacagttgacaatttcatgcggag gcttggaactgttaaaataccagaccatagccaaatgttgaggaaatctcgaagagtagcattttatggtcgaaaacatg cacaaaaagtcataattcattttgtggaccgtaatgttgatataaataaggctactttatcagaagccaaacaaaatcgt aattcaaagatggagacgtacgtaatcgccataggaactgaagtagaacttgatgttacgtcattagaggcaattgcaag tcgaccgagtgaccgttacgtcatcacggttcctagataccaacagcttgtcaatcattggagacaaatcctgccaaaaa tatgcacaggttggtga |
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Protein
| Protein ID | pfu_aug2.0_278.1_27154.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_278.1_27154.t1 MAAAYPTDEQTVISRGLYRLVSDIIGPECIVHLRRQKNDIRDLFMGCDTSKSSKTVTSGSRAEGFLFKSSDADIIDIDSN IVVVKSNTWHLSNTRDFPNILLMETDIVPPGFALLKYLKYDDRDKQLYKSLVRRGNDLYVSSRIARESCAIDGVSYTHGP CNSGGMIGDEYDIAYTLKCPFWPNQAKSFILRSLRHGWPSFDVMKDICEEGCHFVPINSRVHAHSESADLEWRISTVRAE KKLVYSMNHCQFLCYGLMKIILNEVLKKDPETGELLCSYFMKTAVFWEMSEHKEDWSPLNFICKFWNVFRRIIKWVSTGY CPNFFIPQHNMFLGKVFGRHQRDLMTRLRKLHDEGYQFLLRCPSLNKKLTTIINQPLKARRIITNEKDYVKRTEIEAMRM KLIIASSMIDWPTETGQMIKVLSNTVVLTASSNDMTSSLRLNTHNILQRIAVMLFLTNDTQHRSLSNKQRSWYINIAKSI LRKTKSFFCLEKLFHAVCMYRSGNYHKTIDIIHLIKERLQSQQYKYTWNLDGNTVYECKEKGMTYLEILKKLVVSSYTFE SELSVEELKLESSASEETIGCEVLFIPPLLQYLGTLSKPTDLGDSTSSLQIYPKVLSSTTTKTDVLLKSSELFPKGCSNK PADVVFLFDTSSGVSTSQLDAQTSYARDLQKLFYTGRNTTVLTAAVYGSRTNDVPSPQNDANKGLPLKMLSFSSVGGKRN LTSVMNFIELFSRKQARRHTGHVAILFISGSYGVVDDTIARANYIRRTLGIYIYVIKVGNFVGKSDVTKIASSPSRKFVF HVTNSGITASLKELLNIHLCDVQIHPRLTTKAIPKCVAKRPVDVIFSLDEVSIGARHSQIIIYLIEALVSGFDSYRNNIN IALVNSKNINFAKFGRKFKTVDNFMRRLGTVKIPDHSQMLRKSRRVAFYGRKHAQKVIIHFVDRNVDINKATLSEAKQNR NSKMETYVIAIGTEVELDVTSLEAIASRPSDRYVITVPRYQQLVNHWRQILPKICTGW |
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