Gene
| Gene Model ID | pfu_aug2.0_278.1_27155 |
|---|---|
| Locus | scaffold278.1 : 330029 ... 344656 : - |
| To GenomeBrowser | scaffold278.1:330029..344656 |
| Genes list of scaffold | scaffold278.1 |
| Synonym | pfu_aug1.0_9784.1_46100 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_278.1_27155.t1 | 1 | 1 | FAM219A | 44 | 153 | 4.5e-24 | 85.1 | 7.9e-28 | 5.9e-24 | 84.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_278.1_27155.t1 | gi|524865805|ref|XP_005089729.1| | PREDICTED: protein FAM219A-like [Aplysia californica] | 3.0e-26 |
| pfu_aug2.0_278.1_27155.t1 | gi|676479619|ref|XP_009061800.1| | hypothetical protein LOTGIDRAFT_166492 [Lottia gigantea] | 3.0e-25 |
| pfu_aug2.0_278.1_27155.t1 | gi|390360279|ref|XP_003729671.1| | PREDICTED: protein FAM219A isoform X2 [Strongylocentrotus purpuratus] | 2.0e-19 |
| pfu_aug2.0_278.1_27155.t1 | gi|115696770|ref|XP_001178400.1| | PREDICTED: protein FAM219A isoform X1 [Strongylocentrotus purpuratus] | 1.0e-17 |
| pfu_aug2.0_278.1_27155.t1 | gi|675863168|ref|XP_009017144.1| | hypothetical protein HELRODRAFT_191622 [Helobdella robusta] | 7.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_278.1_27155.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_278.1_27155.t1 atgcattttaccttgaatgtagaacttatcgatgaatcagcacctgcaagcaatggtactgcagtaaaatcttcatcaaa tacgtacaagaaatcaacacagcttcagaagaaaataggtacaaataagcatagagaattagcttcaaagaaggccataa caagtcagcctaagaaatctacaatactctcaagaaacaggttaacagtgccacagaagacggctttctcttcccatgat caggacaatcaacccctggttgccataatgtctgatgacagtgatgatgatgactttgaatcaccaatgctatcaaaagc ggcacaaaaagaaataacccaacagttaataaaagacggttataacttagacctagaaccagatgatgaagatcttgacc ttatacccccgcgacccatgaatgaacgatattgctcaaattctacagaaatccagtctttatttcaagcatga |
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Protein
| Protein ID | pfu_aug2.0_278.1_27155.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_278.1_27155.t1 MHFTLNVELIDESAPASNGTAVKSSSNTYKKSTQLQKKIGTNKHRELASKKAITSQPKKSTILSRNRLTVPQKTAFSSHD QDNQPLVAIMSDDSDDDDFESPMLSKAAQKEITQQLIKDGYNLDLEPDDEDLDLIPPRPMNERYCSNSTEIQSLFQA |
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