Gene
| Gene Model ID | pfu_aug2.0_278.1_27156 |
|---|---|
| Locus | scaffold278.1 : 347177 ... 366245 : + |
| To GenomeBrowser | scaffold278.1:347177..366245 |
| Genes list of scaffold | scaffold278.1 |
| Synonym | pfu_aug1.0_952.1_00558 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_278.1_27156.t3 | 6 | 1 | WD40 | 346 | 363 | 4.0e-19 | 67.6 | 0.0069 | 100.0 | 3.0 |
| pfu_aug2.0_278.1_27156.t3 | 6 | 2 | WD40 | 396 | 424 | 4.0e-19 | 67.6 | 6.4e-05 | 0.94 | 9.4 |
| pfu_aug2.0_278.1_27156.t3 | 6 | 3 | WD40 | 434 | 473 | 4.0e-19 | 67.6 | 8.3e-07 | 0.012 | 15.4 |
| pfu_aug2.0_278.1_27156.t3 | 6 | 4 | WD40 | 545 | 579 | 4.0e-19 | 67.6 | 5.4e-09 | 8.0e-05 | 22.3 |
| pfu_aug2.0_278.1_27156.t3 | 6 | 5 | WD40 | 600 | 637 | 4.0e-19 | 67.6 | 4.2e-05 | 0.62 | 10.0 |
| pfu_aug2.0_278.1_27156.t3 | 6 | 6 | WD40 | 672 | 688 | 4.0e-19 | 67.6 | 0.009 | 130.0 | 2.6 |
Transcript
| Transcript ID | pfu_aug2.0_278.1_27156.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_278.1_27156.t1 atgcctcccaaagctcccccaaagaagcaggggcagaccaaaggcaaagctccacgaactagccatggaaaatcaggagg aaaggatggagacgacatgacagatatgggtgacacagagggagaggattggatgcatactaagacattagtgaagccag atgaccagctagacctttcagatcaacaattaaaagaggaatttaccagaatcctgacagcaaacaatcctcatgcacca caaaatattgtcagatacagttttaaggagagacagtacaaacaaacctcccatgttgatcagttggccattcatttcac tctggatggaaacatgctccataaggattctgatgaggctaaacgacaaagagctaggctaggtttaccagaagtgacac aagaagcggcaggtagtgagggtggggagaccacgcctgcagcagcagctgccccagcagaaggggaagaaggcaaagaa gagggaaaggaaggggagcaaactgaggagacaactacccctgccccaggtggagctgaggcaggcaagaaactgaccaa tcagttcaacttcagtgagagggcctcacagacatataacaacccatacagagaaagaggtactgccactgagcctccac ccagagctacattctctgctaatgtcacacagtgggaaatatttgatgcatatcaagaggactttgagaaacaggaaaaa agcaaagaaaagaaaaccattccaggaaggaaagaagaagaaaagacaagaaagaagcttacaattacagaaactcaggg agatgatgtatcaaggatatcaaaggctgctaaaattattgagaggatggtcaatcaaaacacgtatgacgatatcgctc aagatttcaaatactgggaagatccttctgatgaatacagggaaaacgagggtaccatgctgccgttgtggaagttctcg tttgaaaaagccaagaagcttgctgtgacatcactctgctggaatccacgttacaaggatctttttgctgcttcatttgg atcgtatgacttcatgaagcaaggaaatggcatgattctgttctacactttgaagaacccctcattccccgagtacgtct atgaaacagacagcggtgtcatgtgcttagatgttcacaaagagaattcatacttagtagctgttggtttttatgacggt agtgtaggtgtttacagcatcggcaagaaagagccacttcaccgatgtacggccaagaatggcaaacacacagaccctgt atggcaggtacgatggcagaaggatgatttagagaataaccataacttctattcagtgtcatctgatggaaggatagtca actggacaattttaaagaatgaacttacatatgaagatgtcatcacactccatatgcctgatagctcaggagagggacct gacggtaccaaagttagcactataggatgtggcactgcttttgacttccacaagaagaacgactacttgttcctggtggg tacagaggagggtaaaatcaacacgtgttcaaaagcttatagcagccagttcctggattctgtagatgcacataacatgg ctgtatataaagtacgctggaaccccttccatccccgtatctatataacatgcagtgctgactggcaggtcaagatttgg gaggttagcagtcaaaccacagcagacaaaaccgagggaatatcaaatgagtcacaaacaaagaaacctctttttacctt tgatctgaacaactcagtaggtgacgtagcctgggctccttactcatccacagttttcgctgctgtaaccgctgacggaa agatctttatgtacgaccttagcatcaacaaatatgagcctctttgtgaacaaatgattgcacagaagaagaaaacgaag ctgacacatttagaattcaatcctttcgacccaattatcattataggagatgacagaggaaatgttactagtgtgaaaat ttcaccaaacttaaggaaaatgccaaaggaaaagaaaggtgcccctcccccagatcctgctgtgaaagaagccaacgaaa tcgccaaattagaaaagcttctggctatggtacgagaaccatctgatgataaaaagtaa |
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| Transcript ID | pfu_aug2.0_278.1_27156.t2 |
| Definition | - |
>pfu_aug2.0_278.1_27156.t2 atgcctcccaaagctcccccaaagaagcagagtcttgtgccaacgaaagaggccttggccaggaggagggcaacaaggat cagggatggagacgacatgacagatatgggtgacacagagggagaggattggatgcatactaagacattagtgaagccag atgaccagctagacctttcagatcaacaattaaaagaggaatttaccagaatcctgacagcaaacaatcctcatgcacca caaaatattgtcagatacagttttaaggagagacagtacaaacaaacctcccatgttgatcagttggccattcatttcac tctggatggaaacatgctccataaggattctgatgaggctaaacgacaaagagctaggctaggtttaccagaagtgacac aagaagcggcaggtagtgagggtggggagaccacgcctgcagcagcagctgccccagcagaaggggaagaaggcaaagaa gagggaaaggaaggggagcaaactgaggagacaactacccctgccccaggtggagctgaggcaggcaagaaactgaccaa tcagttcaacttcagtgagagggcctcacagacatataacaacccatacagagaaagaggtactgccactgagcctccac ccagagctacattctctgctaatgtcacacagtgggaaatatttgatgcatatcaagaggactttgagaaacaggaaaaa agcaaagaaaagaaaaccattccaggaaggaaagaagaagaaaagacaagaaagaagcttacaattacagaaactcaggg agatgatgtatcaaggatatcaaaggctgctaaaattattgagaggatggtcaatcaaaacacgtatgacgatatcgctc aagatttcaaatactgggaagatccttctgatgaatacagggaaaacgagggtaccatgctgccgttgtggaagttctcg tttgaaaaagccaagaagcttgctgtgacatcactctgctggaatccacgttacaaggatctttttgctgcttcatttgg atcgtatgacttcatgaagcaaggaaatggcatgattctgttctacactttgaagaacccctcattccccgagtacgtct atgaaacagacagcggtgtcatgtgcttagatgttcacaaagagaattcatacttagtagctgttggtttttatgacggt agtgtaggtgtttacagcatcggcaagaaagagccacttcaccgatgtacggccaagaatggcaaacacacagaccctgt atggcaggtacgatggcagaaggatgatttagagaataaccataacttctattcagtgtcatctgatggaaggatagtca actggacaattttaaagaatgaacttacatatgaagatgtcatcacactccatatgcctgatagctcaggagagggacct gacggtaccaaagttagcactataggatgtggcactgcttttgacttccacaagaagaacgactacttgttcctggtggg tacagaggagggtaaaatcaacacgtgttcaaaagcttatagcagccagttcctggattctgtagatgcacataacatgg ctgtatataaagtacgctggaaccccttccatccccgtatctatataacatgcagtgctgactggcaggtcaagatttgg gaggttagcagtcaaaccacagcagacaaaaccgagggaatatcaaatgagtcacaaacaaagaaacctctttttacctt tgatctgaacaactcagtaggtgacgtagcctgggctccttactcatccacagttttcgctgctgtaaccgctgacggaa agatctttatgtacgaccttagcatcaacaaatatgagcctctttgtgaacaaatgattgcacagaagaagaaaacgaag ctgacacatttagaattcaatcctttcgacccaattatcattataggagatgacagaggaaatgttactagtgtgaaaat ttcaccaaacttaaggaaaatgccaaaggaaaagaaaggtgcccctcccccagatcctgctgtgaaagaagccaacgaaa tcgccaaattagaaaagcttctggctatggtacgagaaccatctgatgataaaaagtaa |
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| Transcript ID | pfu_aug2.0_278.1_27156.t3 |
| Definition | - |
>pfu_aug2.0_278.1_27156.t3 atgcctcccaaagctcccccaaagaagcagagtcttgtgccaacgaaagaggccttggccaggaggagggcaacaaggat cagggggcagaccaaaggcaaagctccacgaactagccatggaaaatcaggaggaaaggatggagacgacatgacagata tgggtgacacagagggagaggattggatgcatactaagacattagtgaagccagatgaccagctagacctttcagatcaa caattaaaagaggaatttaccagaatcctgacagcaaacaatcctcatgcaccacaaaatattgtcagatacagttttaa ggagagacagtacaaacaaacctcccatgttgatcagttggccattcatttcactctggatggaaacatgctccataagg attctgatgaggctaaacgacaaagagctaggctaggtttaccagaagtgacacaagaagcggcaggtagtgagggtggg gagaccacgcctgcagcagcagctgccccagcagaaggggaagaaggcaaagaagagggaaaggaaggggagcaaactga ggagacaactacccctgccccaggtggagctgaggcaggcaagaaactgaccaatcagttcaacttcagtgagagggcct cacagacatataacaacccatacagagaaagaggtactgccactgagcctccacccagagctacattctctgctaatgtc acacagtgggaaatatttgatgcatatcaagaggactttgagaaacaggaaaaaagcaaagaaaagaaaaccattccagg aaggaaagaagaagaaaagacaagaaagaagcttacaattacagaaactcagggagatgatgtatcaaggatatcaaagg ctgctaaaattattgagaggatggtcaatcaaaacacgtatgacgatatcgctcaagatttcaaatactgggaagatcct tctgatgaatacagggaaaacgagggtaccatgctgccgttgtggaagttctcgtttgaaaaagccaagaagcttgctgt gacatcactctgctggaatccacgttacaaggatctttttgctgcttcatttggatcgtatgacttcatgaagcaaggaa atggcatgattctgttctacactttgaagaacccctcattccccgagtacgtctatgaaacagacagcggtgtcatgtgc ttagatgttcacaaagagaattcatacttagtagctgttggtttttatgacggtagtgtaggtgtttacagcatcggcaa gaaagagccacttcaccgatgtacggccaagaatggcaaacacacagaccctgtatggcaggtacgatggcagaaggatg atttagagaataaccataacttctattcagtgtcatctgatggaaggatagtcaactggacaattttaaagaatgaactt acatatgaagatgtcatcacactccatatgcctgatagctcaggagagggacctgacggtaccaaagttagcactatagg atgtggcactgcttttgacttccacaagaagaacgactacttgttcctggtgggtacagaggagggtaaaatcaacacgt gttcaaaagcttatagcagccagttcctggattctgtagatgcacataacatggctgtatataaagtacgctggaacccc ttccatccccgtatctatataacatgcagtgctgactggcaggtcaagatttgggaggttagcagtcaaaccacagcaga caaaaccgagggaatatcaaatgagtcacaaacaaagaaacctctttttacctttgatctgaacaactcagtaggtgacg tagcctgggctccttactcatccacagttttcgctgctgtaaccgctgacggaaagatctttatgtacgaccttagcatc aacaaatatgagcctctttgtgaacaaatgattgcacagaagaagaaaacgaagctgacacatttagaattcaatccttt cgacccaattatcattataggagatgacagaggaaatgttactagtgtgaaaatttcaccaaacttaaggaaaatgccaa aggaaaagaaaggtgcccctcccccagatcctgctgtgaaagaagccaacgaaatcgccaaattagaaaagcttctggct atggtacgagaaccatctgatgataaaaagtaa |
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Protein
| Protein ID | pfu_aug2.0_278.1_27156.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_278.1_27156.t1 MPPKAPPKKQGQTKGKAPRTSHGKSGGKDGDDMTDMGDTEGEDWMHTKTLVKPDDQLDLSDQQLKEEFTRILTANNPHAP QNIVRYSFKERQYKQTSHVDQLAIHFTLDGNMLHKDSDEAKRQRARLGLPEVTQEAAGSEGGETTPAAAAAPAEGEEGKE EGKEGEQTEETTTPAPGGAEAGKKLTNQFNFSERASQTYNNPYRERGTATEPPPRATFSANVTQWEIFDAYQEDFEKQEK SKEKKTIPGRKEEEKTRKKLTITETQGDDVSRISKAAKIIERMVNQNTYDDIAQDFKYWEDPSDEYRENEGTMLPLWKFS FEKAKKLAVTSLCWNPRYKDLFAASFGSYDFMKQGNGMILFYTLKNPSFPEYVYETDSGVMCLDVHKENSYLVAVGFYDG SVGVYSIGKKEPLHRCTAKNGKHTDPVWQVRWQKDDLENNHNFYSVSSDGRIVNWTILKNELTYEDVITLHMPDSSGEGP DGTKVSTIGCGTAFDFHKKNDYLFLVGTEEGKINTCSKAYSSQFLDSVDAHNMAVYKVRWNPFHPRIYITCSADWQVKIW EVSSQTTADKTEGISNESQTKKPLFTFDLNNSVGDVAWAPYSSTVFAAVTADGKIFMYDLSINKYEPLCEQMIAQKKKTK LTHLEFNPFDPIIIIGDDRGNVTSVKISPNLRKMPKEKKGAPPPDPAVKEANEIAKLEKLLAMVREPSDDKK |
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| Protein ID | pfu_aug2.0_278.1_27156.t2 |
| Definition | - |
>pfu_aug2.0_278.1_27156.t2 MPPKAPPKKQSLVPTKEALARRRATRIRDGDDMTDMGDTEGEDWMHTKTLVKPDDQLDLSDQQLKEEFTRILTANNPHAP QNIVRYSFKERQYKQTSHVDQLAIHFTLDGNMLHKDSDEAKRQRARLGLPEVTQEAAGSEGGETTPAAAAAPAEGEEGKE EGKEGEQTEETTTPAPGGAEAGKKLTNQFNFSERASQTYNNPYRERGTATEPPPRATFSANVTQWEIFDAYQEDFEKQEK SKEKKTIPGRKEEEKTRKKLTITETQGDDVSRISKAAKIIERMVNQNTYDDIAQDFKYWEDPSDEYRENEGTMLPLWKFS FEKAKKLAVTSLCWNPRYKDLFAASFGSYDFMKQGNGMILFYTLKNPSFPEYVYETDSGVMCLDVHKENSYLVAVGFYDG SVGVYSIGKKEPLHRCTAKNGKHTDPVWQVRWQKDDLENNHNFYSVSSDGRIVNWTILKNELTYEDVITLHMPDSSGEGP DGTKVSTIGCGTAFDFHKKNDYLFLVGTEEGKINTCSKAYSSQFLDSVDAHNMAVYKVRWNPFHPRIYITCSADWQVKIW EVSSQTTADKTEGISNESQTKKPLFTFDLNNSVGDVAWAPYSSTVFAAVTADGKIFMYDLSINKYEPLCEQMIAQKKKTK LTHLEFNPFDPIIIIGDDRGNVTSVKISPNLRKMPKEKKGAPPPDPAVKEANEIAKLEKLLAMVREPSDDKK |
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| Protein ID | pfu_aug2.0_278.1_27156.t3 |
| Definition | - |
>pfu_aug2.0_278.1_27156.t3 MPPKAPPKKQSLVPTKEALARRRATRIRGQTKGKAPRTSHGKSGGKDGDDMTDMGDTEGEDWMHTKTLVKPDDQLDLSDQ QLKEEFTRILTANNPHAPQNIVRYSFKERQYKQTSHVDQLAIHFTLDGNMLHKDSDEAKRQRARLGLPEVTQEAAGSEGG ETTPAAAAAPAEGEEGKEEGKEGEQTEETTTPAPGGAEAGKKLTNQFNFSERASQTYNNPYRERGTATEPPPRATFSANV TQWEIFDAYQEDFEKQEKSKEKKTIPGRKEEEKTRKKLTITETQGDDVSRISKAAKIIERMVNQNTYDDIAQDFKYWEDP SDEYRENEGTMLPLWKFSFEKAKKLAVTSLCWNPRYKDLFAASFGSYDFMKQGNGMILFYTLKNPSFPEYVYETDSGVMC LDVHKENSYLVAVGFYDGSVGVYSIGKKEPLHRCTAKNGKHTDPVWQVRWQKDDLENNHNFYSVSSDGRIVNWTILKNEL TYEDVITLHMPDSSGEGPDGTKVSTIGCGTAFDFHKKNDYLFLVGTEEGKINTCSKAYSSQFLDSVDAHNMAVYKVRWNP FHPRIYITCSADWQVKIWEVSSQTTADKTEGISNESQTKKPLFTFDLNNSVGDVAWAPYSSTVFAAVTADGKIFMYDLSI NKYEPLCEQMIAQKKKTKLTHLEFNPFDPIIIIGDDRGNVTSVKISPNLRKMPKEKKGAPPPDPAVKEANEIAKLEKLLA MVREPSDDKK |
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