Gene
| Gene Model ID | pfu_aug2.0_2780.1_02251 |
|---|---|
| Locus | scaffold2780.1 : 8926 ... 12204 : + |
| To GenomeBrowser | scaffold2780.1:8926..12204 |
| Genes list of scaffold | scaffold2780.1 |
| Synonym | pfu_aug1.0_10683.1_31953 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2780.1_02251.t1 | 2 | 1 | HEXIM | 12 | 57 | 5.7e-22 | 78.1 | 0.039 | 290.0 | 1.6 |
| pfu_aug2.0_2780.1_02251.t1 | 2 | 2 | HEXIM | 74 | 213 | 5.7e-22 | 78.1 | 7.7e-26 | 5.7e-22 | 78.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2780.1_02251.t1 | gi|241573896|ref|XP_002403046.1| | hypothetical protein IscW_ISCW009370 [Ixodes scapularis] | 2.0e-09 |
| pfu_aug2.0_2780.1_02251.t1 | gi|676481914|ref|XP_009062530.1| | hypothetical protein LOTGIDRAFT_128589 [Lottia gigantea] | 6.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_2780.1_02251.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2780.1_02251.t1 atgtttattcaatcaattcggtctactgaagacgaatttgtcatggcagacacttcaacgacagaggatgagacaagggc aggagaaatacagagaaacaaaaacctgaaaaagaaaacaaggcggggtaagaaaaaaagacatttcactcgtagtttga tatacgatttatcagatgaacagaatgagagcgacagttgtggtaaatgtaatatgattaagtctaactggaaagggaca aacgattctggtagaaggtacagaaaaaatcgtggtcagaggaaatcccgtcctgcactccgccctacacacagtccaaa ggcgcctcataattccaaccaatttttgatggacgatcatttcaaatactctttagaatatctgaaatttgactcccctg atccatttggagagagaatatcatacgatgttgattttgataattccccggaaacaatgtacagctttgggcccagcagt gatgcaacattttatcaagatatcgagactaaagagtttatggagagagaatttgaagatcattacaaccaaattagaat aaatgacttaaaggatatgtctaaatcagaacttgttgataaattattgaacatggaaaagcaagcgcaagatctagaaa accagttggactcatccccagataggcctgttaaaagtcttcaacattcaggaaatgtccatgaactggcagattccata tcgtga |
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Protein
| Protein ID | pfu_aug2.0_2780.1_02251.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2780.1_02251.t1 MFIQSIRSTEDEFVMADTSTTEDETRAGEIQRNKNLKKKTRRGKKKRHFTRSLIYDLSDEQNESDSCGKCNMIKSNWKGT NDSGRRYRKNRGQRKSRPALRPTHSPKAPHNSNQFLMDDHFKYSLEYLKFDSPDPFGERISYDVDFDNSPETMYSFGPSS DATFYQDIETKEFMEREFEDHYNQIRINDLKDMSKSELVDKLLNMEKQAQDLENQLDSSPDRPVKSLQHSGNVHELADSI S |
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