Gene
| Gene Model ID | pfu_aug2.0_2780.1_02253 |
|---|---|
| Locus | scaffold2780.1 : 52198 ... 53845 : - |
| To GenomeBrowser | scaffold2780.1:52198..53845 |
| Genes list of scaffold | scaffold2780.1 |
| Synonym | pfu_aug1.0_12685.1_10504 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2780.1_02253.t1 | 1 | 1 | C1q | 60 | 186 | 2.1e-24 | 85.9 | 1.7e-28 | 2.5e-24 | 85.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2780.1_02253.t1 | gi|260801187|ref|XP_002595477.1| | hypothetical protein BRAFLDRAFT_69137 [Branchiostoma floridae] | 5.0e-11 |
| pfu_aug2.0_2780.1_02253.t1 | gi|90077198|dbj|BAE88279.1| | unnamed protein product [Macaca fascicularis] | 1.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_2780.1_02253.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2780.1_02253.t1 atgagagctatatattggttaagcttgaccatagtctgtgctgttaatggctcagagaaaacaccacataccgtgtatgg gatccttggtgacgtcatgaaggaacaactaggcgtgataaaacattgcatggtcagcagatgtaccggaagtccacata gacgacaccgtaatattgctttccaagctcatccttcgaagcatctgcagaatattccagcaaagacgacagtggtattt gacgtggctactgaaaacattggaaatgcatacgatccccggacaggaattttcactgcgccagttgatggagcgtatgt atttcactggacaacattggtacatccgggtaaatatttcatcacatttcttaaagtaaacggggttggtaagagtcata actatggatacgcaaaaaacagcaaagactggtattcaacaagccaaatgtttgttggaagtctgaagagaggggataga gtttggctgtcaacagatggtaatggcggtcaatatcttcatcaagggatatattcgacattctctggatttctcatgta a |
|
Protein
| Protein ID | pfu_aug2.0_2780.1_02253.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2780.1_02253.t1 MRAIYWLSLTIVCAVNGSEKTPHTVYGILGDVMKEQLGVIKHCMVSRCTGSPHRRHRNIAFQAHPSKHLQNIPAKTTVVF DVATENIGNAYDPRTGIFTAPVDGAYVFHWTTLVHPGKYFITFLKVNGVGKSHNYGYAKNSKDWYSTSQMFVGSLKRGDR VWLSTDGNGGQYLHQGIYSTFSGFLM |
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