Gene
| Gene Model ID | pfu_aug2.0_2787.1_25532 |
|---|---|
| Locus | scaffold2787.1 : 3396 ... 5571 : + |
| To GenomeBrowser | scaffold2787.1:3396..5571 |
| Genes list of scaffold | scaffold2787.1 |
| Synonym | pfu_aug1.0_38469.1_26829 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2787.1_25532.t1 | 2 | 1 | 7TM_GPCR_Srw | 52 | 158 | 1.9e-13 | 50.2 | 3.1e-06 | 0.023 | 13.8 |
| pfu_aug2.0_2787.1_25532.t1 | 2 | 1 | 7tm_1 | 61 | 173 | 1.6e-11 | 43.8 | 1.7e-12 | 1.3e-08 | 34.3 |
| pfu_aug2.0_2787.1_25532.t1 | 2 | 2 | 7TM_GPCR_Srw | 216 | 401 | 1.9e-13 | 50.2 | 6.4e-15 | 4.8e-11 | 42.3 |
| pfu_aug2.0_2787.1_25532.t1 | 2 | 2 | 7tm_1 | 256 | 369 | 1.6e-11 | 43.8 | 7.4e-07 | 0.0055 | 15.8 |
Transcript
| Transcript ID | pfu_aug2.0_2787.1_25532.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2787.1_25532.t1 atggattcactcgacttttcttttgaagatctgataaagagatataatgcttccgaatcggatccgtatactaattttag agatggtctggccatgaattttgacgatgtaaatctcagtttcaaattgccgattcttggttacgctttccctgttcttt gtctgattgttctagtgacgaacactctgttcgtgataacttttactgtcggaaaaatgaactcagcaactcacatccta ctgaagaacatcgctattgccgacacattaacaatagtactgcagacgatttgttacgtatacgtgtatactctgggaaa ctacaaggaattcgtaccatttgtattgtgcgaggcctggtacattttggctgtgtatcttccgacgattttccacacgg cttcgatttggctcacatgcattttggctatccagagatatatctgcgtatcttatccacttaaggtacgtatatggtgt ggagttggacgtacttacgtcattttggctatctcctacggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnncctctccatcggatgtcatatttctcgattcttcgagaccgaattcaagaagataactgtccactcgcgtaatgat ccgtcaaagaccatggaatcctgtcatgcttttgtcaccgagcgtttctccccttatacctacatcgctgtctacagctg ggcacgggcagcaatcgtccatattctaccttgtattggcatgatagtcttcagcggacgcatgctgtatatcataaaaa aagccagcaagaacagacagacatttcaacgtcaaggacagacatccggacaaaacgatgctcgagaaaaccgcttgacg acctggcttgtcatttttgtagttgctagcgtgattgtagtggaaatgccaagcgccatttatttcattattttcgctgc agacacggtcattcctgatatggagttgaaatcgaccaatatcaatgagccaattacagtgtcgctcaatgttcttgtaa gcttatcttacccgcttttgttcatcatgtactgttgcatgagcaaaaattttcggaaatcactgaaaggtgtatgttgt cgcgcttgtcattactctgatagagatgactcgggatttgatggtcagaacagcacgagcagaggagggtcgtcaagggt aaccactatatcagacggaggaaaaggtaaaccgaccgcgaaatctatggggtatggaggaggaagtcccctttctgatg acggcatgtatcttaacaacatgagcgggaagtccagagaaatagatccttcacaaaatggaggcaaaagacgctcgaca aagatatccatcttatcacaagaaaagagtagagttcatgatacgaagacgtcaccagggaaggaaagcataacatcgaa cgacatcgaaaataaatctgtaacgagaaagaagaacgaggaaggcgatttcaattcagagcataaaatctgcgacgaaa cagatttccatattccgtgtggaaccgtaggagaggaagctgtcctcaatccacttaatggaacagcggcacgtttagag gaagggattcctcagcatgagaactacccaaaacgcttagaggactaa |
|
Protein
| Protein ID | pfu_aug2.0_2787.1_25532.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2787.1_25532.t1 MDSLDFSFEDLIKRYNASESDPYTNFRDGLAMNFDDVNLSFKLPILGYAFPVLCLIVLVTNTLFVITFTVGKMNSATHIL LKNIAIADTLTIVLQTICYVYVYTLGNYKEFVPFVLCEAWYILAVYLPTIFHTASIWLTCILAIQRYICVSYPLKVRIWC GVGRTYVILAISYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSIGCHISRFFETEFKKITVHSRND PSKTMESCHAFVTERFSPYTYIAVYSWARAAIVHILPCIGMIVFSGRMLYIIKKASKNRQTFQRQGQTSGQNDARENRLT TWLVIFVVASVIVVEMPSAIYFIIFAADTVIPDMELKSTNINEPITVSLNVLVSLSYPLLFIMYCCMSKNFRKSLKGVCC RACHYSDRDDSGFDGQNSTSRGGSSRVTTISDGGKGKPTAKSMGYGGGSPLSDDGMYLNNMSGKSREIDPSQNGGKRRST KISILSQEKSRVHDTKTSPGKESITSNDIENKSVTRKKNEEGDFNSEHKICDETDFHIPCGTVGEEAVLNPLNGTAARLE EGIPQHENYPKRLED |
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