Gene
| Gene Model ID | pfu_aug2.0_279.1_30548 |
|---|---|
| Locus | scaffold279.1 : 59726 ... 65411 : + |
| To GenomeBrowser | scaffold279.1:59726..65411 |
| Genes list of scaffold | scaffold279.1 |
| Synonym | pfu_aug1.0_46037.1_05345 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_279.1_30548.t1 | 1 | 1 | Actin | 7 | 332 | 0.0 | 476.6 | 0.0 | 0.0 | 476.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_279.1_30548.t1 | gi|676421267|ref|XP_009043796.1| | hypothetical protein LOTGIDRAFT_208208 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_279.1_30548.t1 | gi|221122242|ref|XP_002154462.1| | PREDICTED: actin, non-muscle 6.2 [Hydra vulgaris] | 0.0 |
| pfu_aug2.0_279.1_30548.t1 | gi|221125076|ref|XP_002154696.1| | PREDICTED: actin, non-muscle 6.2-like [Hydra vulgaris] | 0.0 |
| pfu_aug2.0_279.1_30548.t1 | gi|390341092|ref|XP_003725373.1| | PREDICTED: actin, cytoskeletal 3B [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_279.1_30548.t1 | gi|348514007|ref|XP_003444532.1| | PREDICTED: actin, cytoplasmic 1-like [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_279.1_30548.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_279.1_30548.t1 atggtgggaatggggcagaaagacagctatgtcggcgatgaagcccaaagcaagagaggtatccttaccctgaagtatcc aattgaacacggtatcgtcacaaactgggatgacatggagaaaatctggcatcacacattttacaacgaactccgtgtag cccctgaagaacaccccgttcttcttaccgaggcccctctgaaccccaaagcaaacagagaaaagatgacgcaaataatg ttcgaaacattcaactctcctgccatgtatgtagccatccaggccgtgttatctttgtacgcttctggtcgtaccacagg gatcgtgctggactccggggacggagtatcccacaccgtccctatctacgagggttacgcccttccccacgccatcatca ggttggatcttgcaggaagagatctgactgactacttaatgaagatcctgactgagcgcgggtactccttcactaccact gccgagagagaaattgtcagggatatcaaagaaaaactttgttacgttgctctggacttcgaacaggagatgcaaactgc agcctcatcatcttccctcgaaaagagctacgaattacctgacggacaggttatcaccattggtaacgagagattccgct gcccggaaacgctgtatcagccatcttttatcggtatggaatccgcaggtatccatgaaactacgtataacagcatcatg aaatgtgacgttgacatccgtaaggacctatacgccaacactgtattgtccggcggtaccaccatgttcccagggatcgc tgaccgtatgcagaaggagattgccgctttagcaccaccaacaatgaaaatcaagattatcgcaccaccagagagaaaat actccgtctggattggtggatccatcttggcatccctctccaccttccagcagatgtggatcagcaagcaggaatacgat gaatccggcccatccatcgtgcatagaaagtgtttctaa |
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Protein
| Protein ID | pfu_aug2.0_279.1_30548.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_279.1_30548.t1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTT AEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPETLYQPSFIGMESAGIHETTYNSIM KCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEIAALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD ESGPSIVHRKCF |
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