Gene
| Gene Model ID | pfu_aug2.0_279.1_30551 |
|---|---|
| Locus | scaffold279.1 : 80776 ... 127209 : + |
| To GenomeBrowser | scaffold279.1:80776..127209 |
| Genes list of scaffold | scaffold279.1 |
| Synonym | pfu_aug1.0_344.1_29196 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_279.1_30551.t1 | 1 | 1 | fn3 | 255 | 334 | 1.8e-07 | 31.1 | 9.8e-11 | 4.8e-07 | 29.8 |
| pfu_aug2.0_279.1_30551.t1 | 1 | 1 | Kringle | 1033 | 1101 | 5.3e-14 | 52.0 | 4.0e-17 | 2.0e-13 | 50.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_279.1_30551.t1 | gi|529447642|ref|XP_005243521.1| | PREDICTED: hepatocyte growth factor [Falco peregrinus] | 1.0e-12 |
| pfu_aug2.0_279.1_30551.t1 | gi|507680450|ref|XP_004639313.1| | PREDICTED: hepatocyte growth factor isoform X2 [Octodon degus] | 1.0e-12 |
| pfu_aug2.0_279.1_30551.t1 | gi|507680446|ref|XP_004639312.1| | PREDICTED: hepatocyte growth factor isoform X1 [Octodon degus] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_279.1_30551.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_279.1_30551.t1 atgggtacacggatcctgtttgccgtggggcttgccgtattgtgcgccctacaatcctgtcaagctgctcagattgtcca actaagtttgacgatattccatctcaagataattttgacgaagataagttacttcgatgtgtcagaacagaacatggcgg cgcgcactttcaaagaggtgctcttgtggaatttttgtgtaattactccagaaattaatgaaatacccagcttcgaacta cgagactttaatgcatcgatgtttaaaggaaaatggtacacccaactgaagactacttatgcatttggaagcaatgagta tccatctggtgttcaagactttgaagaagtatcaataggagtgtataatatgacctacacagctttcagttttccagaaa acaaatgtaaattaattatccacccacgcatgaagatggtcaagagactagggaattacatttacaatgctccgtattct gaattccatttgcttgtggtgtacaccaactatgaacatgcctttgtcgtacagtgcttcggagaattggataatcatgg acaatgcatacatggacagactcgatatgcaatatggacccgtaatattgacgtccccacaaagcgtgtcatgaacaaaa tgaaacatatagccgaggatcagctctgcttgtcgtttgcggatttccatgaagttgctcagggactttgtaatctcaaa gaagaggaagagctggtacatgtggatgaatcacgcagccctccaaggccaggccatatagttgctgagcatcatagtac tgagattgacatctcatgggcttcctccaatgacattagtgttatagtgagaggataccatgttagtatcggttctgata taaatcacatgaccactcacgacgtaggtggggaaatcttccactacaagtttgaacatctcactccagacactcattat ttgatcaaagtacaaggatttaacaaccatggacagggtgcttctatctacaaacacgtcagaactgatgctcttgttgt tggaaagtgtaaccttgaccagctgaccattcaggagaactttgaccttgacaggtttatgggagtttggcatttacgat cggaaacaactttcctcggggatggtcacatatggaaatctcttaccatgcgactctctcatgatgacaatggcaattta cacatggcttatgcaggaacgttggatcatgtatgtgtacacgtccaggatgcccagtataatgaaattcaaccaggtta ttacgagcatcatactggatcgcaagattccttcttaaagatccactacactgattaccattatgctgtggtggatattt gtcttggttctacatatgatcgtcactgtaaccgttcggaagaggaagtggaagtctggtcacatgacacaaatccagtt cctacggcagtcgaggctcacctaaaaaatatcatcgagactgatctgtgtgttaactacagggaaatggtggaagctac tccaggcatgtgtgcactaccagctccacacaaggactccgattgccttttacaaaacgttgaggtacaacaaggatttg acaagactcagtttgttggaatatggtatgacagatttgccacacattatctgccttctgctaatattcactcccaaacc aggaaatacggacttgacgaaaatggtgacatgcattttgcattctcgggaattgtaaatggagtttgtaccaatgttca tgatgtcaaattacacgagatccaaccaggattctacgatcatcaaggaaaagtgccatattattcaaagatcgtgtaca ctgactacaactatgctttggttgaatggtgtttgaacggtaatgcaacaagctgtcccatgaaggaagtagagatctgg tcacgcaccactgaccccctaccggctctgatggaggcatctttagaagatatggcctccagtaatctgtgtgttcctcc tcaggacctcaaggaactcgccgtcaacgaatgcccagagccaattcttacttatggtttatgtgccgtacccgcaccac atcatgatggtgattgcctcctgaaaaatgtagcagtgcaagaaaattttgacatgagcaagttctcagggcgatggttc agtaaggtatcctctaaatactgggagagcacggtgatccattcagagaccagagtatttggtgtcgacgacaacggcgt ggttcacatgtcagaatcggaatatgtaaatgatgtttgtgtgacactacttgatgagacgttaactgaaatccagccag gcttctacaaacatgtagcacatagcacctattacatgaaggtgcactacacagattaccactacgctgttgtagaaatg tgctatggagatgatcacatgacctgctcgcagaatcaggtagagatctggtcacgtgatcgtgatgacatccccgtttt aacggaaacagctttagaggacatggtgtcaggcaatctatgtgtacctccaagtgaactacacaaactcgtaacagctg agtgtgaagatccagtcttagccattggaagcagatgtaatttggatcgcatcaaaacacaggcagacttccagatcaag atgttccttggacgctggtattcgagatacgccattgattacacaggtagatctacaaatatgcatcatctgaagcgtac attctcattagacgatcaaggcatcctccatggtgtgatactaggtgaaatggacggtaaatgtgtacatcgacaagatg ttaaattttatcctcagggagacggtgtgtacttcagacccgcaacgaaagaagatccaaattctggttatatccgtgtg cacttcactgattacacgtacgccatcctggacgtgtgtttcggtaactatactgaccatcactgtgatcgagaccatga agtggtagagatcttgtcccgtcaccaggaccctgtacctgaacagatgttaaatctccttgacaacattctagacagca atatgtgcatcaagctggacgacatgaagcatcttaatccagttgactgcttcacacctggaacggactactttggacct cacaacacaacggagaatggacgtgcttgtcagagatgggatgcggcaacgccccacaaacataactacggtcactatta cttggccatggacaattattgtcgaacatttgatcattctgtaccctggtgttacactatggacccaacacatcgatggg aaaactgctcagtacctctttgtcgtgactgtaatggaaccacccttaaagcagaatatacaaggtgtgaattcgtgcat gcacaagctcactttgacgagagtaagtttgagggtgtgtggcacatggtttcctccaccagctacaactgggaaggtgc tgtcttcacctccagctccatgagaatcaaatttgacgagaacggcaccatgcatacagcttctgcagctttagaatcgg gagctacagactgtaccaaggtctcggaatataaatcctaccgtgtcgaaccaggagtatacagccatacaaatggacta cacacttttgtggaggtctcctacaccgattatgagtatgccattgtatattcctgctttggagaagacccctcagacca tcgctgtaagaaagggcatgagagtatttctatatggtcccgacacaccactgccatacctgagacggagagacaccacc tggacgctatcgtcagcagagattattgtattcctctcgtagacatgcatgacatggttcaagggtcatgtgacatacca gaaataaatctcggaaactgtgatctggacaacctctctatacaggaacatttcaacctaacagcatttttgggagaatg gcacttgcgttccgatacacggctaatttccaacgacaagccatggcagtccctaaccacacgctggtctgtagatagcc aaggacaacttcacgttgcttacgccggaatcttggagttagacacgtgtgtacaggtgaaggatacactatacaccgag ttatcggcacccggacattataaacaccacacagaggctgagaattcctacatcaagattcactacactgactatcactt cgcgatcgtggatatctgcttcggtaaatccgacgagcatcactgtgacaagacgtcggaggaagttcagatcctgtccc gtgacaccaatccaatacccaagacaaggatgcacttactgaaggccgtagctagcggagatctctgtattaattttgac gacttccataatgttacaacaggactatgccaggtacctgcaccacatgtagctggagattgttctattgaccaaatcag tgtacaagagaactttgacgtaaagtcgttcaatggatattggcatagcagacttagcactctctatggtgacctaaaga acgtacactcagaattctggaagtttgcacaggacagtaaccataaggaatatgtgtcactgtcagaaacaataaacacc acttgtaaatacctgacaaacatggagcttgtagagttagttccaggattttatgaacatacaggagcaaatcacttcct gatgcgagtctaa |
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Protein
| Protein ID | pfu_aug2.0_279.1_30551.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_279.1_30551.t1 MGTRILFAVGLAVLCALQSCQAAQIVQLSLTIFHLKIILTKISYFDVSEQNMAARTFKEVLLWNFCVITPEINEIPSFEL RDFNASMFKGKWYTQLKTTYAFGSNEYPSGVQDFEEVSIGVYNMTYTAFSFPENKCKLIIHPRMKMVKRLGNYIYNAPYS EFHLLVVYTNYEHAFVVQCFGELDNHGQCIHGQTRYAIWTRNIDVPTKRVMNKMKHIAEDQLCLSFADFHEVAQGLCNLK EEEELVHVDESRSPPRPGHIVAEHHSTEIDISWASSNDISVIVRGYHVSIGSDINHMTTHDVGGEIFHYKFEHLTPDTHY LIKVQGFNNHGQGASIYKHVRTDALVVGKCNLDQLTIQENFDLDRFMGVWHLRSETTFLGDGHIWKSLTMRLSHDDNGNL HMAYAGTLDHVCVHVQDAQYNEIQPGYYEHHTGSQDSFLKIHYTDYHYAVVDICLGSTYDRHCNRSEEEVEVWSHDTNPV PTAVEAHLKNIIETDLCVNYREMVEATPGMCALPAPHKDSDCLLQNVEVQQGFDKTQFVGIWYDRFATHYLPSANIHSQT RKYGLDENGDMHFAFSGIVNGVCTNVHDVKLHEIQPGFYDHQGKVPYYSKIVYTDYNYALVEWCLNGNATSCPMKEVEIW SRTTDPLPALMEASLEDMASSNLCVPPQDLKELAVNECPEPILTYGLCAVPAPHHDGDCLLKNVAVQENFDMSKFSGRWF SKVSSKYWESTVIHSETRVFGVDDNGVVHMSESEYVNDVCVTLLDETLTEIQPGFYKHVAHSTYYMKVHYTDYHYAVVEM CYGDDHMTCSQNQVEIWSRDRDDIPVLTETALEDMVSGNLCVPPSELHKLVTAECEDPVLAIGSRCNLDRIKTQADFQIK MFLGRWYSRYAIDYTGRSTNMHHLKRTFSLDDQGILHGVILGEMDGKCVHRQDVKFYPQGDGVYFRPATKEDPNSGYIRV HFTDYTYAILDVCFGNYTDHHCDRDHEVVEILSRHQDPVPEQMLNLLDNILDSNMCIKLDDMKHLNPVDCFTPGTDYFGP HNTTENGRACQRWDAATPHKHNYGHYYLAMDNYCRTFDHSVPWCYTMDPTHRWENCSVPLCRDCNGTTLKAEYTRCEFVH AQAHFDESKFEGVWHMVSSTSYNWEGAVFTSSSMRIKFDENGTMHTASAALESGATDCTKVSEYKSYRVEPGVYSHTNGL HTFVEVSYTDYEYAIVYSCFGEDPSDHRCKKGHESISIWSRHTTAIPETERHHLDAIVSRDYCIPLVDMHDMVQGSCDIP EINLGNCDLDNLSIQEHFNLTAFLGEWHLRSDTRLISNDKPWQSLTTRWSVDSQGQLHVAYAGILELDTCVQVKDTLYTE LSAPGHYKHHTEAENSYIKIHYTDYHFAIVDICFGKSDEHHCDKTSEEVQILSRDTNPIPKTRMHLLKAVASGDLCINFD DFHNVTTGLCQVPAPHVAGDCSIDQISVQENFDVKSFNGYWHSRLSTLYGDLKNVHSEFWKFAQDSNHKEYVSLSETINT TCKYLTNMELVELVPGFYEHTGANHFLMRV |
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