Gene
| Gene Model ID | pfu_aug2.0_279.1_30557 |
|---|---|
| Locus | scaffold279.1 : 249895 ... 261896 : + |
| To GenomeBrowser | scaffold279.1:249895..261896 |
| Genes list of scaffold | scaffold279.1 |
| Synonym | pfu_aug1.0_1987.1_29936 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_279.1_30557.t1 | 1 | 1 | DUF3524 | 11 | 176 | 0.0 | 207.9 | 0.0 | 0.0 | 207.3 |
| pfu_aug2.0_279.1_30557.t1 | 1 | 1 | Glyco_trans_1_4 | 277 | 385 | 2.5e-09 | 37.4 | 9.4e-13 | 4.6e-09 | 36.5 |
| pfu_aug2.0_279.1_30557.t1 | 1 | 1 | Glycos_transf_1 | 278 | 391 | 1.9e-09 | 37.2 | 7.4e-13 | 3.7e-09 | 36.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_279.1_30557.t1 | gi|597773833|ref|XP_007250646.1| | PREDICTED: glycosyltransferase-like domain-containing protein 1 isoform X1 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_279.1_30557.t1 | gi|260829521|ref|XP_002609710.1| | hypothetical protein BRAFLDRAFT_285910 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_279.1_30557.t1 | gi|731209009|ref|XP_010619251.1| | PREDICTED: glycosyltransferase-like domain-containing protein 1 isoform X1 [Fukomys damarensis] | 0.0 |
| pfu_aug2.0_279.1_30557.t1 | gi|148229515|ref|NP_001089509.1| | glycosyltransferase-like domain-containing protein 1 [Xenopus laevis] | 0.0 |
| pfu_aug2.0_279.1_30557.t1 | gi|507926954|ref|XP_004674736.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_279.1_30557.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_279.1_30557.t1 atggtagatgtagggcacaaggatttttccaaggtactcattgtggaacctttttacggtggatctcacaaacagttagt agaccttttgaagaaatatatcccaggatgcactcttgttaccatgacagcaaagaagtggcactggagagcaagaacag cagctttgtcattggctgatatgattccttgtgatgagaattatagggcattattctgcagttctgtactaaatctagcg gagttagtcgccctgagaccagatttggctaagctgaggaaagttgtctattttcatgaaaaccagttggtatatccagt aagaaaaagtcaagacagagatttccagtatggatacaatcagatattaacatgtttaaatgcagatgaagttattttca attcagagttcaacaaggattcttttctgacatctatcaagtcctttttgaagttaatgccagattacagaccaaaagga ctagccgaaaaaatcggaaagaaatcaagggtcgtttattttcctgttgattttgaaaaacagttgggaagtgaagggga accatctcatcgtacaaaaattgataacgaatctgaaaataccggcaaaatagtaaactgtgtctccatatctgataaaa cagaatcaatacaagacagtgcagtagaagatggcagccaaagtaatacaaaaaaatgtagttacacacatttggcaaaa accaatcttacggattctagagaggttttaaggactgattatatgaggggaaaatctgaacctattggtcagctgcagag tggaggctttatagaaaagtcaggaactttacacattgtatgggcacatagatgggagcatgataaagaccctgagacat ttctgagagtgatgatgagactgcataacgaaggctttaacttcaaattgtctgtgctaggagagcagtatacagatgta cctgatatatttaccagagctaaagaagaattaactaccaaagtagctcactggggttttttggatagtaagactgagta caacacagttttgagggaatgtgatgtggccgtttccactgcgctgcatgagttctttggagtatcaatgttggaggctg catacttaggatgttaccctctctgtcctaacagacttgtgtatcctgagatttatcctactaccagacagatggacata cagacagatggacactgtacaaagtga |
|
Protein
| Protein ID | pfu_aug2.0_279.1_30557.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_279.1_30557.t1 MVDVGHKDFSKVLIVEPFYGGSHKQLVDLLKKYIPGCTLVTMTAKKWHWRARTAALSLADMIPCDENYRALFCSSVLNLA ELVALRPDLAKLRKVVYFHENQLVYPVRKSQDRDFQYGYNQILTCLNADEVIFNSEFNKDSFLTSIKSFLKLMPDYRPKG LAEKIGKKSRVVYFPVDFEKQLGSEGEPSHRTKIDNESENTGKIVNCVSISDKTESIQDSAVEDGSQSNTKKCSYTHLAK TNLTDSREVLRTDYMRGKSEPIGQLQSGGFIEKSGTLHIVWAHRWEHDKDPETFLRVMMRLHNEGFNFKLSVLGEQYTDV PDIFTRAKEELTTKVAHWGFLDSKTEYNTVLRECDVAVSTALHEFFGVSMLEAAYLGCYPLCPNRLVYPEIYPTTRQMDI QTDGHCTK |
|