Gene
| Gene Model ID | pfu_aug2.0_2797.1_25539 |
|---|---|
| Locus | scaffold2797.1 : 42346 ... 46472 : + |
| To GenomeBrowser | scaffold2797.1:42346..46472 |
| Genes list of scaffold | scaffold2797.1 |
| Synonym | pfu_aug1.0_11178.1_10274 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2797.1_25539.t1 | 2 | 1 | SNARE | 143 | 171 | 5.7e-06 | 25.9 | 0.0062 | 46.0 | 3.8 |
| pfu_aug2.0_2797.1_25539.t1 | 2 | 2 | SNARE | 374 | 429 | 5.7e-06 | 25.9 | 6.6e-09 | 4.9e-05 | 22.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2797.1_25539.t1 | gi|558193451|ref|XP_006129841.1| | PREDICTED: synaptosomal-associated protein 47 isoform X1 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_2797.1_25539.t1 | gi|558193455|ref|XP_006129842.1| | PREDICTED: synaptosomal-associated protein 47 isoform X2 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_2797.1_25539.t1 | gi|260794723|ref|XP_002592357.1| | hypothetical protein BRAFLDRAFT_101243 [Branchiostoma floridae] | 7.00649e-44 |
Transcript
| Transcript ID | pfu_aug2.0_2797.1_25539.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2797.1_25539.t1 atggctcattattctgattttccaataagggaatggtcggcttcgtattacggaaatgatgatcgtacatggtattatgg cctactgcacatgaacgctgcaggagttagctttatagaaggttattcaaaatcccccgtccccctgttactacacctca agtacacagatatcgtagaggtaaaaaagacgacgactgggctgatatttggagcactggtcttagtcactaacactggc ctgaaacactggatatcctcactggcagacaggagcagtgttttcaatgcgctttgttatttcaaaagatgtcaagtttt acccagtgtcagtaaatctgcacctgtcaatactggaggaaaaacagagatggggaaaaagctgctgaatgtggcatatg attctcagaacactctgaatgaggctgctaccatgttaaaataccagggcgaccagcttgattctgctgccctaacgatg acggacattcatggcgaccttgacattgcagataacttaatatccggcttggagaaatggtttggtaaatggacgattcc cgaggaatatcgacacattgagccaatgatagtaaagaaagacgatctatcacaggatatggaatatgaagtgttatata caaaactggagacaagtaaactcaataaccaaaacttgggaatactgagaatttgtcatgaggggctttatattcttact gaaaaacaaaaaatggtgcatcatttcaaatggactgatatctctaaagtgaaagtagtcagcctttgggagattgttgt aacacggttcctgattggacaaccggatctcagtttttctattgtgttctccactttgttttcggtactaaaaattctgg aacaacgtcttagaagtaaggtagaatattcccaggatgcatttaaacaaatggctgaaccagtaccgttaaaaggttcc aagctgtcaccagcagaggaaaaaaaccagttaggcagttataattggaggcaagacagacaggatggggaaattctctc tacagaaggtcggagttttgaaacaggcggcaaaaaccagtcaacgatcggaattcaaaaatccaaggaagttgtcactg agcaagaagcaacagaactgagtggtgtactatctgacctgacatccctagccttggcagcacagagggagatggacgta caaaatgaaaagatagacaaactctctggtacggtgcaagatgccaatgatagacttaaagatacagaaaatagagtgaa aaagttgttatga |
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Protein
| Protein ID | pfu_aug2.0_2797.1_25539.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2797.1_25539.t1 MAHYSDFPIREWSASYYGNDDRTWYYGLLHMNAAGVSFIEGYSKSPVPLLLHLKYTDIVEVKKTTTGLIFGALVLVTNTG LKHWISSLADRSSVFNALCYFKRCQVLPSVSKSAPVNTGGKTEMGKKLLNVAYDSQNTLNEAATMLKYQGDQLDSAALTM TDIHGDLDIADNLISGLEKWFGKWTIPEEYRHIEPMIVKKDDLSQDMEYEVLYTKLETSKLNNQNLGILRICHEGLYILT EKQKMVHHFKWTDISKVKVVSLWEIVVTRFLIGQPDLSFSIVFSTLFSVLKILEQRLRSKVEYSQDAFKQMAEPVPLKGS KLSPAEEKNQLGSYNWRQDRQDGEILSTEGRSFETGGKNQSTIGIQKSKEVVTEQEATELSGVLSDLTSLALAAQREMDV QNEKIDKLSGTVQDANDRLKDTENRVKKLL |
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