Gene
| Gene Model ID | pfu_aug2.0_28.1_26680 |
|---|---|
| Locus | scaffold28.1 : 149058 ... 161375 : - |
| To GenomeBrowser | scaffold28.1:149058..161375 |
| Genes list of scaffold | scaffold28.1 |
| Synonym | pfu_aug1.0_5003.1_23708 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_28.1_26680.t2 | 1 | 1 | BTB | 33 | 131 | 4.0e-11 | 42.9 | 4.8e-15 | 7.1e-11 | 42.0 |
Transcript
| Transcript ID | pfu_aug2.0_28.1_26680.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26680.t1 atggccatgggtcaccaccaaaagttttatacaaatcagatttattcgagttcattactgagtcagctagcttatatgtg gaggaatgatgtgttgtgtgatgctgtaatcaggtcaggggtcatcagtgttaaggcccacagagttttgctgattgcgt catgtcccatgttacagtccatggagagttctacagtcggttcacagctagaagtgagactggctgccgacatcaaagaa aagtccataaacactttcctacagtatctgtatgaaggatttatgctgctgacagaggagaactgtagagacatagagaa gataggaagactcctacaagttgacagtgtaatacagtgctgtgctgatttccataaaagtatcagctcgaggacgaatg tcacagatacaagtgacttttacagatttggtttccatggtaaccatgaattccgccatgtgcgtagttctgatgtgctg actacgcatggctctgattttacagacccatcctctaggagttcttcaaatctaagatcttcaaggtcagcaagtggtca cagatcagattttactcgttccaatgattctggcctaaaacggatctcggagacaaactcttgtggagatcagagacaga ctagtgtaggtgtaaacataatcagtagtacattacggaacagtggtacagaaatcttaaatctaggttctgacagagga ccctcagctgggacacacagaaagatgtcagaggaagattcaataacaagttattccaggaaagatgatccacaaacatc tgatgtgaatatggatggagaaagtccaattacaagttttaatagagatttttacacggaagatagtcagcacatgtcaa atagactcagtgactcattacaaacaaccgagccacatgatttgtcaaatctttcagctatgcgttctcaagaaactttt agccatacacacagtgaaccaacaccacaacatgaagatggtacagatttatcacatccttcgaatggacaaagtgaatc aaccgcacatgtatcacaggctacaaacacatcacaaaaacagataacgaatgagggaaaagttagtaatgcgatgggca aaagtcaggattcatctacaaggtatgaggatagacggccagaatcctccctgtctgctgagagtattgatctgaccatt gtgaagcatgaagcagtagacaatcagtgtaaaaagagtcaggacagcagagcaggcgatatttag |
|
| Transcript ID | pfu_aug2.0_28.1_26680.t2 |
| Definition | - |
>pfu_aug2.0_28.1_26680.t2 atgcaaggttttaccatggccatgggtcaccaccaaaagttttatacaaatcagatttattcgagttcattactgagtca gctagcttatatgtggaggaatgatgtgttgtgtgatgctgtaatcaggtcaggggtcatcagtgttaaggcccacagag ttttgctgattgcgtcatgtcccatgttacagtccatggagagttctacagtcggttcacagctagaagtgagactggct gccgacatcaaagaaaagtccataaacactttcctacagtatctgtatgaaggatttatgctgctgacagaggagaactg tagagacatagagaagataggaagactcctacaagttgacagtgtaatacagtgctgtgctgatttccataaaagtatca gctcgaggacgaatgtcacagatacaagtgacttttacagatttggtttccatggtaaccatgaattccgccatgtgcgt agttctgatgtgctgactacgcatggctctgattttacagacccatcctctaggagttcttcaaatctaagatcttcaag gtcagcaagtggtcacagatcagattttactcgttccaatgattctggcctaaaacggatctcggagacaaactcttgtg gagatcagagacagactagtgtaggtgtaaacataatcagtagtacattacggaacagtggtacagaaatcttaaatcta ggttctgacagaggaccctcagctgggacacacagaaagatgtcagaggaagattcaataacaagttattccaggaaaga tgatccacaaacatctgatgtgaatatggatggagaaagtccaattacaagttttaatagagatttttacacggaagata gtcagcacatgtcaaatagactcagtgactcattacaaacaaccgagccacatgatttgtcaaatctttcagctatgcgt tctcaagaaacttttagccatacacacagtgaaccaacaccacaacatgaagatggtacagatttatcacatccttcgaa tggacaaagtgaatcaaccgcacatgtatcacaggctacaaacagtaatatcactcctgttttatcagcatcacaaaaac agataacgaatgagggaaaagttagtaatgcgatgggcaaaagtcaggattcatctacaaggtatgaggatagacggcca gaatcctccctgtctgctgagagtattgatctgaccattgtgaagcatgaagcagtagacaatcagtgtaaaaagagtca ggacagcagagcaggcgtgtnttgtgagtggagcaagctgtgggcagagcaagttctcactacaagagtgcattttaata tcagaatgaatataaacctgacaaatccgaatcagtatgcagtagttatagaggataatgaaatggtaaaatcctcctca aagtcactcgttcacatgtatttcatgtag |
|
Protein
| Protein ID | pfu_aug2.0_28.1_26680.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26680.t1 MAMGHHQKFYTNQIYSSSLLSQLAYMWRNDVLCDAVIRSGVISVKAHRVLLIASCPMLQSMESSTVGSQLEVRLAADIKE KSINTFLQYLYEGFMLLTEENCRDIEKIGRLLQVDSVIQCCADFHKSISSRTNVTDTSDFYRFGFHGNHEFRHVRSSDVL TTHGSDFTDPSSRSSSNLRSSRSASGHRSDFTRSNDSGLKRISETNSCGDQRQTSVGVNIISSTLRNSGTEILNLGSDRG PSAGTHRKMSEEDSITSYSRKDDPQTSDVNMDGESPITSFNRDFYTEDSQHMSNRLSDSLQTTEPHDLSNLSAMRSQETF SHTHSEPTPQHEDGTDLSHPSNGQSESTAHVSQATNTSQKQITNEGKVSNAMGKSQDSSTRYEDRRPESSLSAESIDLTI VKHEAVDNQCKKSQDSRAGDI |
|
| Protein ID | pfu_aug2.0_28.1_26680.t2 |
| Definition | - |
>pfu_aug2.0_28.1_26680.t2 MQGFTMAMGHHQKFYTNQIYSSSLLSQLAYMWRNDVLCDAVIRSGVISVKAHRVLLIASCPMLQSMESSTVGSQLEVRLA ADIKEKSINTFLQYLYEGFMLLTEENCRDIEKIGRLLQVDSVIQCCADFHKSISSRTNVTDTSDFYRFGFHGNHEFRHVR SSDVLTTHGSDFTDPSSRSSSNLRSSRSASGHRSDFTRSNDSGLKRISETNSCGDQRQTSVGVNIISSTLRNSGTEILNL GSDRGPSAGTHRKMSEEDSITSYSRKDDPQTSDVNMDGESPITSFNRDFYTEDSQHMSNRLSDSLQTTEPHDLSNLSAMR SQETFSHTHSEPTPQHEDGTDLSHPSNGQSESTAHVSQATNSNITPVLSASQKQITNEGKVSNAMGKSQDSSTRYEDRRP ESSLSAESIDLTIVKHEAVDNQCKKSQDSRAGVXCEWSKLWAEQVLTTRVHFNIRMNINLTNPNQYAVVIEDNEMVKSSS KSLVHMYFM |
|