Gene
| Gene Model ID | pfu_aug2.0_28.1_26683 |
|---|---|
| Locus | scaffold28.1 : 195342 ... 200800 : + |
| To GenomeBrowser | scaffold28.1:195342..200800 |
| Genes list of scaffold | scaffold28.1 |
| Synonym | pfu_aug1.0_5003.1_23711 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_28.1_26683.t1 | 1 | 1 | TMEM154 | 293 | 400 | 5.3e-06 | 26.2 | 4.2e-09 | 5.3e-06 | 26.2 |
Transcript
| Transcript ID | pfu_aug2.0_28.1_26683.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26683.t1 atgtatataacgacttgtattgttttgggactagcagtatggcattcaaatgtatataaagccgcagcacaacttgacga gacatcaaatcgaacattcgcatgttacggcaccgccaattctctgttatcacccagttgtccctctgggtctctggtag caccatatcaggtctctgccggagccaagactaatgccacgggatgtcccagggagatcgtcgacccagcccaggcggat gtgtgctgtgtctttgactctaatgactgccatggtgaatacctgaacgtggatagtcagagtacgtcctatatatacca tgcagattgtgtgggacgtgagaactgtgtgggttttgcacgacaagcatctaatatggacattaattacctgtcttgtt caccctccttcacctaccctgaccagaccaactacatgtttatggacttctactgtataccaggtacacgagttggtacc atctcgtcagccaatattcagagcagtacggacatgatctacctcagaggtcaagactacacaacatcaggcatcgccgt gacgtcagcttcctgttctgtcgaatctgacgactgtgatgtcatcatctccgtgtacgcccttgacctaagactagcaa acgattccacaggcgcctgtatccaagaactttcattgtctggcaccgtcttggattgttcagatgacaataacttcaag atcaatgagatttatcagagttccaacaattatatgactgtaaacttaagcagcactgccaccaatgatgggtatttctg gattggatttaacacctcctcttcaagcagcgacattctgacactgagatgccccgcccagagtcaacagactgtgtgta ccaccaccaccaccgagcccacgacagtcaccaccgacataacgacggaaaaggccactgataattcaacagacaatacc acagaggaaacaacgacagagatgaccaacacaacgatgcaaagcccactacctgcacatgagggtagagcatcaagtat cagttggggggttgtcatagcagtggtagtaatcatcttggtagttatcgtaggtgtagttgtaatcgtcgtttactgca ttaaaaaaggaaaagaagatggccaagacctaaaggatgcagataaaagctctactgagaacgactcggacagttttcct caagataaagctccagtcatcacaaactctaatcctccaacgaccacaagactaaatactccttcacagcagaaaaatgg tattactacaccgcttattgaaagtaatttaccgccattgaatcaaacaaacattaaaatggatgtagaggatacagaga gtagactatcaactgacgtgccactggcaaaggagcgggaaaaagatagcttaacaaacttgagaaccatgaatccaatc ggacttgaaattgatatgccgcaggcttcaggatcacaattgccttttgaatcgacagaaaaacagaaaaagaagaaaaa gaaaaagaaaaagagaaagacaattgacagggaagaaaataagccagttgatgatgagttaaaagaaccacaagaggtac ctcctggtgacgaagctgaggcaccacttcctgatagtagtgaagttatcaacgaagaaagaaagaaaaagaaacgaaag aaaaagagaaccgaagtaagtgatgaaaatgacaatatcgatgtcactggcgatggtcaggacaatagggagaagagaaa aaagaaaaagaaaaagaagaaattggagaaaattgacgaaagaacgatggacgattttatcaaggatcacgaagaaaata aaccttttcacaatcaagttgcacctgtttag |
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Protein
| Protein ID | pfu_aug2.0_28.1_26683.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26683.t1 MYITTCIVLGLAVWHSNVYKAAAQLDETSNRTFACYGTANSLLSPSCPSGSLVAPYQVSAGAKTNATGCPREIVDPAQAD VCCVFDSNDCHGEYLNVDSQSTSYIYHADCVGRENCVGFARQASNMDINYLSCSPSFTYPDQTNYMFMDFYCIPGTRVGT ISSANIQSSTDMIYLRGQDYTTSGIAVTSASCSVESDDCDVIISVYALDLRLANDSTGACIQELSLSGTVLDCSDDNNFK INEIYQSSNNYMTVNLSSTATNDGYFWIGFNTSSSSSDILTLRCPAQSQQTVCTTTTTEPTTVTTDITTEKATDNSTDNT TEETTTEMTNTTMQSPLPAHEGRASSISWGVVIAVVVIILVVIVGVVVIVVYCIKKGKEDGQDLKDADKSSTENDSDSFP QDKAPVITNSNPPTTTRLNTPSQQKNGITTPLIESNLPPLNQTNIKMDVEDTESRLSTDVPLAKEREKDSLTNLRTMNPI GLEIDMPQASGSQLPFESTEKQKKKKKKKKKRKTIDREENKPVDDELKEPQEVPPGDEAEAPLPDSSEVINEERKKKKRK KKRTEVSDENDNIDVTGDGQDNREKRKKKKKKKKLEKIDERTMDDFIKDHEENKPFHNQVAPV |
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