Gene
| Gene Model ID | pfu_aug2.0_28.1_26686 |
|---|---|
| Locus | scaffold28.1 : 247077 ... 292751 : - |
| To GenomeBrowser | scaffold28.1:247077..292751 |
| Genes list of scaffold | scaffold28.1 |
| Synonym | pfu_aug1.0_131178.1_13830 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_28.1_26686.t1 | 2 | 1 | PH | 98 | 245 | 3.0e-10 | 40.2 | 1.6e-13 | 1.2e-09 | 38.2 |
| pfu_aug2.0_28.1_26686.t1 | 1 | 1 | Oxysterol_BP | 369 | 710 | 0.0 | 300.9 | 0.0 | 0.0 | 300.2 |
| pfu_aug2.0_28.1_26686.t1 | 2 | 2 | PH | 668 | 681 | 3.0e-10 | 40.2 | 0.52 | 3800.0 | -1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_28.1_26686.t1 | gi|676466765|ref|XP_009057671.1| | hypothetical protein LOTGIDRAFT_217357 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_28.1_26686.t1 | gi|551499339|ref|XP_005801220.1| | PREDICTED: oxysterol-binding protein-related protein 8-like isoform X1 [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_28.1_26686.t1 | gi|594695681|ref|XP_007195048.1| | PREDICTED: oxysterol-binding protein-related protein 8 isoform X2 [Balaenoptera acutorostrata scammoni] | 0.0 |
| pfu_aug2.0_28.1_26686.t1 | gi|634866914|ref|XP_007945747.1| | PREDICTED: oxysterol-binding protein-related protein 8 [Orycteropus afer afer] | 0.0 |
| pfu_aug2.0_28.1_26686.t1 | gi|594695679|ref|XP_007195047.1| | PREDICTED: oxysterol-binding protein-related protein 8 isoform X1 [Balaenoptera acutorostrata scammoni] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_28.1_26686.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26686.t1 atgcgacgccatcacagcggcagtgattcctccaccaaaggacatggtgaagaacaccttgaagcctctaatggcatgca catgtcatcatctggaaattccctctccatcgctaaaaatagagcaaattctgagtccaagctattcactcctccctcag aaaaagataaggctagcagttctaacaaactgtccaagagggaatcccttaaggtacagaagaaaaattacagaagtcag aagaaacaggcaacaaaagaactgctcagtacactatcagactcctctgtagttatccttgcagactggcttaaagtcag aggtacccttaaaagctggaccaagctatggtgtgtccttaagccgggtcttctggtcatttacaaaagtgagaagcaaa aaagcagtcattgggtaggaacagtgttactaaatacgtgccgtctgatagaacggccatccaaaaaagatggattttgt ttcaagcttttccaccctctggaccagtctatatgggcaccaagtgtttcaanccgtctgatagaacggccatccaaaaa agatggattttgtttcaagcttttccaccctctggaccagtctatatgggccaccaagggaccaaaaggagaaacaatgg gagccattgtacagcctttaccatactcctacctcatcttcagggctctgtctgaatctgctggcaaatgttggatggat gccctggagctagccctgcgatgtacaggcctgttaatgaggtcgatgaagaaggacacggaacaatcacgtaacgagag tctccctgccgattcctcacaagacatcctcacacaatccttccataataactcactggaacatctcaatgaaagtgact gtgaaaaacatttcgaaggtcaaggactggatgaggatgtgaagacagacaaagaggaaggacgtacagactcggaaaca gaatcagaagacgaggttgtgagggtatcacaggaggctggacctcctcatgagactccatatgtagagaatatcactga ggagttagggcagcaaggagactcgtcacaaacagaggaagtcaatgatgaaaataaaagtttgatatggactcttgtta aacaggtacgaccaggtatggatttatcaaaggtagttcttcctacgttcatccttgagcctcgatcattcctagacaaa ctatcagattattactaccatgcagatttgttatcagaagcagtgaggtatgatgatccttacacaagaatgaaaactgt tgtcaagtggtatttatctggattctataagaaacctaagggtctgaagaagccatacaatccaatcataggtgagacat ttagatgttactggagacacccagacacaaacagtcggacattctacatagctgaacagatttcccaccatcctccagtc tcggcattccacattacaaatcgtcaggacggctttaatatcagcggcagcatactggctaaatctaaattctatggtaa ctccctttcggctatattagatggcacggccaagctgacgtttctgaagagaggggaggactactacatcaccatgccgt acgcacactgtaaaggtattttgattgggaccttgacaatggagatgggaggaaaggtgtccatagactgtcctaaaact ggctacagggcagacctggaattcaaacttaagccattccttaatatgggagaagcatccaataaaataacaggaaagtt aaaaatgggatcagatacactggctacactggagggacactgggaccaagaaatacacatcaaggacaaaaacaccgggg agagtgaagtgttttggtgtccgacacctgagataaaagctcggagacttaaacgatacacagtagcactagaggcacag tcagatatggaatcagaaaagctatggaagaacgtgagtgacgctgtgataacatgtgacatgcacacggcgacacagga gaagtatatcctagaggagagacagaggaaggaagccaaggaacgtaaagccaagctggtagaatgggtacctaatctgt ttgaacgggaccttattacaggggactggatgtataaacatgtagacatgaggccttgggaccaaagcaatgataaacta cagtatgagcatgagtatacaatacagacatggaccaagcatcgtacgcctgtagtcaggacatgtagtataacgagcct ggaccagcagccggaggtgttcccaccctcaggtatacacggagtgagggccacgaggaactcgatcaagataaaaccac tcaatgtagtgggagaggagagtgagagctcagctccggagacagaactcaggcgagaaagtgactcctcagaaccgagt aaagtgagacgccttacaaggtcatcctccagcaataaatacaggatgtcagaggaaactctagctaagttactccagcc attactgcaatcccaacaggaaacaaactcgtcactcaaagtcttacagaatcaggtcattggcctctcacatcgtctgg agaatcaacacgatactccatttttgtctcaaaacagggactggttaatactggcagccatcttgactttccaaattttc ttgcaatggctgttcaagtaa |
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Protein
| Protein ID | pfu_aug2.0_28.1_26686.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26686.t1 MRRHHSGSDSSTKGHGEEHLEASNGMHMSSSGNSLSIAKNRANSESKLFTPPSEKDKASSSNKLSKRESLKVQKKNYRSQ KKQATKELLSTLSDSSVVILADWLKVRGTLKSWTKLWCVLKPGLLVIYKSEKQKSSHWVGTVLLNTCRLIERPSKKDGFC FKLFHPLDQSIWAPSVSXRLIERPSKKDGFCFKLFHPLDQSIWATKGPKGETMGAIVQPLPYSYLIFRALSESAGKCWMD ALELALRCTGLLMRSMKKDTEQSRNESLPADSSQDILTQSFHNNSLEHLNESDCEKHFEGQGLDEDVKTDKEEGRTDSET ESEDEVVRVSQEAGPPHETPYVENITEELGQQGDSSQTEEVNDENKSLIWTLVKQVRPGMDLSKVVLPTFILEPRSFLDK LSDYYYHADLLSEAVRYDDPYTRMKTVVKWYLSGFYKKPKGLKKPYNPIIGETFRCYWRHPDTNSRTFYIAEQISHHPPV SAFHITNRQDGFNISGSILAKSKFYGNSLSAILDGTAKLTFLKRGEDYYITMPYAHCKGILIGTLTMEMGGKVSIDCPKT GYRADLEFKLKPFLNMGEASNKITGKLKMGSDTLATLEGHWDQEIHIKDKNTGESEVFWCPTPEIKARRLKRYTVALEAQ SDMESEKLWKNVSDAVITCDMHTATQEKYILEERQRKEAKERKAKLVEWVPNLFERDLITGDWMYKHVDMRPWDQSNDKL QYEHEYTIQTWTKHRTPVVRTCSITSLDQQPEVFPPSGIHGVRATRNSIKIKPLNVVGEESESSAPETELRRESDSSEPS KVRRLTRSSSSNKYRMSEETLAKLLQPLLQSQQETNSSLKVLQNQVIGLSHRLENQHDTPFLSQNRDWLILAAILTFQIF LQWLFK |
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