Gene
| Gene Model ID | pfu_aug2.0_28.1_26687 |
|---|---|
| Locus | scaffold28.1 : 310463 ... 321331 : - |
| To GenomeBrowser | scaffold28.1:310463..321331 |
| Genes list of scaffold | scaffold28.1 |
| Synonym | pfu_aug1.0_18046.1_25694 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_28.1_26687.t1 | 2 | 1 | Cor1 | 79 | 208 | 0.0 | 163.2 | 0.0 | 0.0 | 163.2 |
| pfu_aug2.0_28.1_26687.t1 | 2 | 2 | Cor1 | 219 | 222 | 0.0 | 163.2 | 3.8 | 9400.0 | -3.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_28.1_26687.t1 | gi|676447795|ref|XP_009051525.1| | hypothetical protein LOTGIDRAFT_152756 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_28.1_26687.t1 | gi|168693567|ref|NP_001108302.1| | synaptonemal complex protein 3 [Xenopus laevis] | 0.0 |
| pfu_aug2.0_28.1_26687.t1 | gi|585671047|ref|XP_006817982.1| | PREDICTED: synaptonemal complex protein 3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_28.1_26687.t1 | gi|524898932|ref|XP_005105908.1| | PREDICTED: synaptonemal complex protein 3-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_28.1_26687.t1 | gi|524898934|ref|XP_005105909.1| | PREDICTED: synaptonemal complex protein 3-like isoform X2 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_28.1_26687.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26687.t1 atgccaaaaggccaaagaaaagaaatcgagaaagctcctgaaactaagggaaaacaaaaacttggtttagatgagtgcgg ggattctccaaatgagttttctcctggaagcagcccaatgagagatcgtgaaacaccaatagtacctagagctgcaaaga aacgaccagtggaagaggaacaagattttggttctgagatgcagaagatgttggaagggttcggagctgacatttcaaaa acattggttcagaaaaggaaaagactagagtctttcactcaaaactctctgaaatcatcaaacagaaaagtggatgaaat ttggaaaattcaacaaacagaaaggaacaaacttcatgatgaatactgcagacaagtcagtacagttttccaacagtggg aggcagatcttgagaaaacaaaggagcaagaagaaaagcttacacaattatttaagcaacagcaaaagttatttcaacaa gccaggatagttcagagtcagcgactgaaaacaataaggcagctccatgatcagtactcaaagggcatagatgacctgga caagtctcatgagggacaacaagtatctgtgcaatctgaactcaagaaagaaatggctctcctacagaaaagaatattaa tggacacacaacaacaagaaatggcaaatgtgagaaagtcattgcagacaatgctgttttag |
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Protein
| Protein ID | pfu_aug2.0_28.1_26687.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26687.t1 MPKGQRKEIEKAPETKGKQKLGLDECGDSPNEFSPGSSPMRDRETPIVPRAAKKRPVEEEQDFGSEMQKMLEGFGADISK TLVQKRKRLESFTQNSLKSSNRKVDEIWKIQQTERNKLHDEYCRQVSTVFQQWEADLEKTKEQEEKLTQLFKQQQKLFQQ ARIVQSQRLKTIRQLHDQYSKGIDDLDKSHEGQQVSVQSELKKEMALLQKRILMDTQQQEMANVRKSLQTMLF |
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