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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_28.1_26689
Locus scaffold28.1 : 333842 ... 355179 : +
To GenomeBrowser scaffold28.1:333842..355179
Genes list of scaffold scaffold28.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_28.1_26689.t1 gi|524896597|ref|XP_005104771.1| PREDICTED: ER membrane protein complex subunit 10-like [Aplysia californica] 2.0e-21
pfu_aug2.0_28.1_26689.t1 gi|676447798|ref|XP_009051526.1| hypothetical protein LOTGIDRAFT_228275 [Lottia gigantea] 4.0e-18
pfu_aug2.0_28.1_26689.t1 gi|585671054|ref|XP_006817983.1| PREDICTED: ER membrane protein complex subunit 10-like [Saccoglossus kowalevskii] 2.0e-10
pfu_aug2.0_28.1_26689.t1 gi|91076710|ref|XP_972261.1| PREDICTED: ER membrane protein complex subunit 10 [Tribolium castaneum] 1.0e-08
pfu_aug2.0_28.1_26689.t1 gi|632984244|ref|XP_007909044.1| PREDICTED: ER membrane protein complex subunit 10 [Callorhinchus milii] 3.0e-08

Transcript
Transcript IDpfu_aug2.0_28.1_26689.t1
Definition-
>pfu_aug2.0_28.1_26689.t1
atgtctacaccatatctctgcatattaatcggatttctgacggcatcggcagatgatgaatttgaaggaatcaggacact
gaccctggaacatacactggatcatggtccaaatccaatatttactaagagaggcaccatagcagtaaggtctgtaaagg
gaaacaaagcccagttttcacaaactattccattcacagaggaagacagagaaaaattagagagtttagtggagcagaat
gacatatacagaatacgtattcccatcaagacggcaccactctctgatgatgactatgtttcaacttacactctagcatg
tggggtatatgaatccaatctctcagatcatantttcagtctctgcatattaatcggatttctgacggcatcggcagatg
atgaatttgaaggtatcaggacactgaccctggaacataccctggatcatggtccaaatccaatatttactaagagaggc
accatagcagtaaggtcagtaaagggaaacaaagcccagttttcacaaacaatacctttcacagaggaggacagagaaaa
attagagagtttagtggagcagaatgacatatacagaatacgtattcccatcaagacggcaccactctctgatgatgact
atgtttcaacttacactctggcatccagacactcagagttatatagaaaaattgaaaaaagatga

Protein
Protein IDpfu_aug2.0_28.1_26689.t1
Definition-
>pfu_aug2.0_28.1_26689.t1
MSTPYLCILIGFLTASADDEFEGIRTLTLEHTLDHGPNPIFTKRGTIAVRSVKGNKAQFSQTIPFTEEDREKLESLVEQN
DIYRIRIPIKTAPLSDDDYVSTYTLACGVYESNLSDHXFSLCILIGFLTASADDEFEGIRTLTLEHTLDHGPNPIFTKRG
TIAVRSVKGNKAQFSQTIPFTEEDREKLESLVEQNDIYRIRIPIKTAPLSDDDYVSTYTLASRHSELYRKIEKR

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