Gene
| Gene Model ID | pfu_aug2.0_28.1_26691 |
|---|---|
| Locus | scaffold28.1 : 383865 ... 390355 : - |
| To GenomeBrowser | scaffold28.1:383865..390355 |
| Genes list of scaffold | scaffold28.1 |
| Synonym | pfu_aug1.0_462.1_15070 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_28.1_26691.t1 | 1 | 1 | I-set | 60 | 147 | 2.9e-20 | 71.8 | 1.5e-23 | 4.6e-20 | 71.2 |
| pfu_aug2.0_28.1_26691.t1 | 2 | 1 | Ig_2 | 69 | 146 | 8.3e-12 | 45.0 | 2.8e-15 | 8.3e-12 | 45.0 |
| pfu_aug2.0_28.1_26691.t1 | 3 | 1 | Ig_3 | 72 | 134 | 2.3e-06 | 27.9 | 7.9e-10 | 2.3e-06 | 27.9 |
| pfu_aug2.0_28.1_26691.t1 | 3 | 2 | Ig_3 | 187 | 197 | 2.3e-06 | 27.9 | 3.1 | 9200.0 | -2.8 |
| pfu_aug2.0_28.1_26691.t1 | 2 | 2 | Ig_2 | 206 | 206 | 8.3e-12 | 45.0 | 2.2 | 6700.0 | -2.7 |
| pfu_aug2.0_28.1_26691.t1 | 3 | 3 | Ig_3 | 225 | 244 | 2.3e-06 | 27.9 | 1.8 | 5300.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_28.1_26691.t1 | gi|676466133|ref|XP_009057468.1| | hypothetical protein LOTGIDRAFT_121777 [Lottia gigantea] | 2.0e-32 |
| pfu_aug2.0_28.1_26691.t1 | gi|572304685|ref|XP_006618297.1| | PREDICTED: LOW QUALITY PROTEIN: twitchin-like [Apis dorsata] | 5.0e-20 |
| pfu_aug2.0_28.1_26691.t1 | gi|347966284|ref|XP_321463.5| | AGAP001633-PA [Anopheles gambiae str. PEST] | 8.0e-20 |
| pfu_aug2.0_28.1_26691.t1 | gi|350413804|ref|XP_003490119.1| | 8.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_28.1_26691.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26691.t1 atggaacgccatcgctgtcttatgatgagatatttcaatatattggatggtttaatcaatatatgcgcatctccaatacc taaagtatcagccagcagagagcctacacctctcagaaggtccagacagccatcattagagccagtacctgagccaccta aggaagagagaccagactttaactttggtctgcgtcctcgtctaattcaggccggcacagacttcaaactcctgtgtatt gttcaatcaacacccactcctaaggtcacctggacaaaggacggcaaggacctttccaggaatgatcattacatgctgtc atactcctctggtgtgtgtaccatggaggtacagaacgcacgtgtagaggatactggacggtacacatgtagtgccatca acgatctaggagaggaagaaacacacactaatgttgttgttgaaggagacagtgatacagatcgcgtgcatacaggattg gacaagaagcttagcctaggtacggtgccacgtttaacccggcatacatcattagaaccatcttacaacagacgagcgag tcacgcagattactcatcatcgtataaagattcctcatactcaacgtcctcacgatacggaaaatctggacgttatatcg ataactatagttatgatgattcatacacgagtcgcagctctcgtaggcaaagtaagtcatcgtacgatacctaccgtagc tcttctaaatatagtgactctactaaatcttacaaggatagtgtaagggatctgatttattga |
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Protein
| Protein ID | pfu_aug2.0_28.1_26691.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26691.t1 MERHRCLMMRYFNILDGLINICASPIPKVSASREPTPLRRSRQPSLEPVPEPPKEERPDFNFGLRPRLIQAGTDFKLLCI VQSTPTPKVTWTKDGKDLSRNDHYMLSYSSGVCTMEVQNARVEDTGRYTCSAINDLGEEETHTNVVVEGDSDTDRVHTGL DKKLSLGTVPRLTRHTSLEPSYNRRASHADYSSSYKDSSYSTSSRYGKSGRYIDNYSYDDSYTSRSSRRQSKSSYDTYRS SSKYSDSTKSYKDSVRDLIY |
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