Gene
Gene Model ID | pfu_aug2.0_28.1_26693 |
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Locus | scaffold28.1 : 393087 ... 400005 : - |
To GenomeBrowser | scaffold28.1:393087..400005 |
Genes list of scaffold | scaffold28.1 |
Synonym | pfu_aug1.0_7452.1_60249 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_28.1_26693.t1 | 3 | 1 | I-set | 5 | 91 | 3.7e-31 | 106.8 | 1.1e-16 | 2.4e-13 | 49.7 |
pfu_aug2.0_28.1_26693.t1 | 3 | 1 | fn3 | 101 | 183 | 0.0 | 158.2 | 9.2e-16 | 1.9e-12 | 47.1 |
pfu_aug2.0_28.1_26693.t1 | 3 | 2 | I-set | 163 | 178 | 3.7e-31 | 106.8 | 2.3 | 5000.0 | -2.6 |
pfu_aug2.0_28.1_26693.t1 | 3 | 2 | fn3 | 200 | 285 | 0.0 | 158.2 | 2.4e-18 | 5.0e-15 | 55.3 |
pfu_aug2.0_28.1_26693.t1 | 3 | 3 | I-set | 313 | 391 | 3.7e-31 | 106.8 | 6.1e-18 | 1.3e-14 | 53.8 |
pfu_aug2.0_28.1_26693.t1 | 3 | 3 | fn3 | 396 | 477 | 0.0 | 158.2 | 3.6e-17 | 7.6e-14 | 51.6 |
pfu_aug2.0_28.1_26693.t1 | 1 | 1 | Pkinase | 545 | 669 | 4.5e-30 | 104.6 | 3.2e-33 | 6.9e-30 | 104.0 |
pfu_aug2.0_28.1_26693.t1 | 1 | 1 | Pkinase_Tyr | 547 | 668 | 8.1e-19 | 67.6 | 5.2e-22 | 1.1e-18 | 67.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_28.1_26693.t1 | gi|751473351|ref|XP_011192027.1| | PREDICTED: twitchin isoform X3 [Bactrocera cucurbitae] | 0.0 |
pfu_aug2.0_28.1_26693.t1 | gi|751473349|ref|XP_011192025.1| | PREDICTED: twitchin isoform X2 [Bactrocera cucurbitae] | 0.0 |
pfu_aug2.0_28.1_26693.t1 | gi|751473353|ref|XP_011192028.1| | PREDICTED: twitchin isoform X4 [Bactrocera cucurbitae] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_28.1_26693.t1 |
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Definition | - |
>pfu_aug2.0_28.1_26693.t1 atgagagctccaccaaagatagagaaggagatcaaagatcaacaggttcaggtcggagaagtgctcaaactgaaaatacc agtcagtggaactggaccattcgaggtcaaggtcaagaaggataaccgtgaccttcctgagagtgataggttcaaggtca ctccatttgatgactatgttgtattgaatctcaaagactgtacactagatgacactggtagttacaaagtggagatcagc aacccaagtggtacagcagatgtcaacttcaaaactaagattgtcagtgctccatctaaacccactggaccattgaatgt tggtgacatcactaagagtggttgtaagttgtcatggaaaccacccagggagacaggtggcgctaaaatccagaactata tcatagagagacaggaagtgggcaaaccatactgggtcactgtgtcttcacattgcaaggactgcaatcaagatgtacag ggacttgccgaggatcaccagtacaagttccgtgtatcggcagttaacgaacacggccaatcagaacccctggaggctga gagtcctatcacagccaaaatgccatttgacaagccggatgcccctggtattcccagtgttacagaagtgggcggagact ttgtcagtctacaatgggataaaccaagatcagatggagggggccgtatcactggctactggatagataaacgtgaacat ggcacagataactggaacagagtcaacttgcagccatgtatcactaacatgatcaatataccaaacctggtggaggacaa gcagtacgagttcagagtgttcgctgaaaatgaggctggacttagtaaaccttccatggcttctaacagtgtcaaggtca aagatcctaatgctcctcccaagattcaccttccaaacagattcaaagaagtcagcacgttcgagaaaggtgaaccagtt gttatcaaaataccatttaccggaaatcccaaaccgtcagttaaatggctgagagagggagaggagatcaagggtcgtaa cttcaatatggaggttactgaccgtcatgctatactgaccatcaaggaggctaccaaagaaaacgatggtccataccatc tacatctggagaacgagatgggatcagactcggctactatcaccatacaaatcaatgaccgtcccagtccaccccgcttc ccattggttgagaacattcgtgaggattctgtagtgttgtcatggaaaccacctcttcatgatggaggcagctttattac cggatatgaaatagagaaatgtgaaccaccaatagagaactgggtccgagtgacaaccactaggatgaccttccataaca tcacagggctgtcatcagggaaagaatataaattccgtatcatagcagaaaacttctacggaaaaagcgaaccctgtgaa ccaacaagtatcgtccaaacagaggatgctgatgccaaaaagaaaaagcaattggaagatgagatgggcagaaagatcag gggcaaatatgatggaccaaagattaatgactatgataaattttatgatgatctttggaagaagtatgtgcctcagcctg taacgattaaacaagacagcatctacgatcattatgacattctagaggaactgggaagtggggctttcggtgtcgtccat cgctgtgtggagaaagctacgggacgcgtctttgtcgctaaattcattaacacgccatacccgctagataaagccactgt gaagaatgaaatcaatgttatgaacaatctacatcatcctaaactgcttcagcttcatgatgcttttgaggacaggaatg aaatgatcttagttttagaattcttggctggtggagagttgtttgacaggattgctgctgatgattataagatgacggag gctgaggtcattaactacatgagacaagtgtgtgaaggtctcaaacacatgcacgaacacagaattgttcacctggatgt caagaatcaaatatccagaaaatgtaatgtgcaccacaaagaagtcaacagatgtcaagatgattga |
Protein
Protein ID | pfu_aug2.0_28.1_26693.t1 |
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Definition | - |
>pfu_aug2.0_28.1_26693.t1 MRAPPKIEKEIKDQQVQVGEVLKLKIPVSGTGPFEVKVKKDNRDLPESDRFKVTPFDDYVVLNLKDCTLDDTGSYKVEIS NPSGTADVNFKTKIVSAPSKPTGPLNVGDITKSGCKLSWKPPRETGGAKIQNYIIERQEVGKPYWVTVSSHCKDCNQDVQ GLAEDHQYKFRVSAVNEHGQSEPLEAESPITAKMPFDKPDAPGIPSVTEVGGDFVSLQWDKPRSDGGGRITGYWIDKREH GTDNWNRVNLQPCITNMINIPNLVEDKQYEFRVFAENEAGLSKPSMASNSVKVKDPNAPPKIHLPNRFKEVSTFEKGEPV VIKIPFTGNPKPSVKWLREGEEIKGRNFNMEVTDRHAILTIKEATKENDGPYHLHLENEMGSDSATITIQINDRPSPPRF PLVENIREDSVVLSWKPPLHDGGSFITGYEIEKCEPPIENWVRVTTTRMTFHNITGLSSGKEYKFRIIAENFYGKSEPCE PTSIVQTEDADAKKKKQLEDEMGRKIRGKYDGPKINDYDKFYDDLWKKYVPQPVTIKQDSIYDHYDILEELGSGAFGVVH RCVEKATGRVFVAKFINTPYPLDKATVKNEINVMNNLHHPKLLQLHDAFEDRNEMILVLEFLAGGELFDRIAADDYKMTE AEVINYMRQVCEGLKHMHEHRIVHLDVKNQISRKCNVHHKEVNRCQDD |