Gene
| Gene Model ID | pfu_aug2.0_28.1_26694 |
|---|---|
| Locus | scaffold28.1 : 400067 ... 407245 : - |
| To GenomeBrowser | scaffold28.1:400067..407245 |
| Genes list of scaffold | scaffold28.1 |
| Synonym | pfu_aug1.0_7452.1_60249 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_28.1_26694.t1 | 9 | 1 | fn3 | 6 | 54 | 0.0 | 450.6 | 8.7e-07 | 0.0012 | 18.9 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 1 | Y_Y_Y | 39 | 52 | 1.8e-14 | 53.1 | 0.26 | 350.0 | 1.0 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 1 | SusE | 70 | 102 | 8.8e-06 | 25.5 | 4.7 | 6300.0 | -3.1 |
| pfu_aug2.0_28.1_26694.t1 | 9 | 2 | fn3 | 72 | 156 | 0.0 | 450.6 | 9.2e-19 | 1.2e-15 | 57.3 |
| pfu_aug2.0_28.1_26694.t1 | 6 | 1 | Tissue_fac | 74 | 147 | 6.0e-08 | 32.3 | 1.3 | 1800.0 | -1.4 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 1 | I-set | 128 | 150 | 1.4e-35 | 121.0 | 5.2 | 7100.0 | -3.1 |
| pfu_aug2.0_28.1_26694.t1 | 9 | 3 | fn3 | 173 | 256 | 0.0 | 450.6 | 9.4e-23 | 1.3e-19 | 70.1 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 2 | SusE | 183 | 230 | 8.8e-06 | 25.5 | 0.0069 | 9.3 | 6.0 |
| pfu_aug2.0_28.1_26694.t1 | 6 | 2 | Tissue_fac | 189 | 248 | 6.0e-08 | 32.3 | 0.14 | 190.0 | 1.8 |
| pfu_aug2.0_28.1_26694.t1 | 5 | 1 | Ig_2 | 190 | 260 | 4.1e-13 | 49.2 | 0.37 | 500.0 | 0.9 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 2 | Y_Y_Y | 210 | 257 | 1.8e-14 | 53.1 | 9.5e-05 | 0.13 | 12.0 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 2 | I-set | 225 | 251 | 1.4e-35 | 121.0 | 0.062 | 83.0 | 3.1 |
| pfu_aug2.0_28.1_26694.t1 | 5 | 2 | Ig_2 | 270 | 361 | 4.1e-13 | 49.2 | 1.5e-06 | 0.002 | 18.2 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 3 | I-set | 278 | 361 | 1.4e-35 | 121.0 | 1.4e-15 | 1.8e-12 | 46.9 |
| pfu_aug2.0_28.1_26694.t1 | 9 | 4 | fn3 | 338 | 353 | 0.0 | 450.6 | 6.7 | 9000.0 | -3.2 |
| pfu_aug2.0_28.1_26694.t1 | 9 | 5 | fn3 | 367 | 449 | 0.0 | 450.6 | 3.1e-19 | 4.2e-16 | 58.8 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 3 | SusE | 380 | 409 | 8.8e-06 | 25.5 | 0.088 | 120.0 | 2.5 |
| pfu_aug2.0_28.1_26694.t1 | 6 | 3 | Tissue_fac | 383 | 448 | 6.0e-08 | 32.3 | 0.00099 | 1.3 | 8.7 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 3 | Y_Y_Y | 409 | 452 | 1.8e-14 | 53.1 | 8.8e-05 | 0.12 | 12.1 |
| pfu_aug2.0_28.1_26694.t1 | 5 | 3 | Ig_2 | 411 | 448 | 4.1e-13 | 49.2 | 0.42 | 570.0 | 0.7 |
| pfu_aug2.0_28.1_26694.t1 | 9 | 6 | fn3 | 468 | 552 | 0.0 | 450.6 | 1.0e-21 | 1.3e-18 | 66.8 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 4 | SusE | 479 | 512 | 8.8e-06 | 25.5 | 0.034 | 46.0 | 3.8 |
| pfu_aug2.0_28.1_26694.t1 | 6 | 4 | Tissue_fac | 480 | 515 | 6.0e-08 | 32.3 | 0.68 | 920.0 | -0.4 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 4 | Y_Y_Y | 506 | 553 | 1.8e-14 | 53.1 | 0.0013 | 1.8 | 8.3 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 4 | I-set | 512 | 552 | 1.4e-35 | 121.0 | 0.63 | 850.0 | -0.2 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 5 | I-set | 575 | 658 | 1.4e-35 | 121.0 | 6.0e-16 | 8.1e-13 | 48.0 |
| pfu_aug2.0_28.1_26694.t1 | 5 | 4 | Ig_2 | 591 | 658 | 4.1e-13 | 49.2 | 2.8e-07 | 0.00038 | 20.5 |
| pfu_aug2.0_28.1_26694.t1 | 9 | 7 | fn3 | 667 | 746 | 0.0 | 450.6 | 4.7e-18 | 6.3e-15 | 55.0 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 5 | SusE | 677 | 698 | 8.8e-06 | 25.5 | 0.75 | 1000.0 | -0.5 |
| pfu_aug2.0_28.1_26694.t1 | 6 | 5 | Tissue_fac | 680 | 746 | 6.0e-08 | 32.3 | 0.0081 | 11.0 | 5.8 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 5 | Y_Y_Y | 720 | 747 | 1.8e-14 | 53.1 | 0.26 | 350.0 | 1.0 |
| pfu_aug2.0_28.1_26694.t1 | 9 | 8 | fn3 | 765 | 849 | 0.0 | 450.6 | 1.7e-22 | 2.2e-19 | 69.3 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 6 | SusE | 774 | 794 | 8.8e-06 | 25.5 | 0.12 | 160.0 | 2.1 |
| pfu_aug2.0_28.1_26694.t1 | 6 | 6 | Tissue_fac | 776 | 840 | 6.0e-08 | 32.3 | 0.0045 | 6.1 | 6.6 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 6 | I-set | 818 | 844 | 1.4e-35 | 121.0 | 3.4 | 4600.0 | -2.5 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 6 | Y_Y_Y | 832 | 844 | 1.8e-14 | 53.1 | 0.11 | 140.0 | 2.2 |
| pfu_aug2.0_28.1_26694.t1 | 9 | 9 | fn3 | 865 | 950 | 0.0 | 450.6 | 2.4e-18 | 3.2e-15 | 56.0 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 7 | SusE | 878 | 901 | 8.8e-06 | 25.5 | 0.12 | 160.0 | 2.1 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 7 | Y_Y_Y | 908 | 958 | 1.8e-14 | 53.1 | 0.0041 | 5.5 | 6.8 |
| pfu_aug2.0_28.1_26694.t1 | 7 | 7 | I-set | 967 | 1001 | 1.4e-35 | 121.0 | 2.6e-06 | 0.0035 | 17.1 |
| pfu_aug2.0_28.1_26694.t1 | 5 | 5 | Ig_2 | 981 | 1001 | 4.1e-13 | 49.2 | 0.5 | 670.0 | 0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_28.1_26694.t1 | gi|642911111|ref|XP_008200583.1| | PREDICTED: twitchin isoform X10 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_28.1_26694.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26694.t1 atggttccaagttatgttgttgagaagtgtgaggaggggtcagatttctgggacaaggttcctggtgttgtcatgggaac gtcacaccctgtcaaggggctcaaagagggaaagaaatacaagttccgagtcaaggcagaaaatatctacggtgctggag aaccactggtcactgataaaccaactctggctaaaaatccatttgatactcctgatgctccaagagatgttaccattcct aagtacgacaagaactctgcagaaatccactggaaagaaccaaacagtgacggtggtaatccaatcaaaggctatattgt tgagaagaaacccaagtctggagaatgggtgccgtgtaataacttccctgttaaggataccaacttcaccgttatgggac tgaaagaaggtcaagtccttgagttcagggtcaaggccgtcaatgatggtggtgagggcaaacccagcaaagcaactgaa cctcataaagtcagagaccaagtcttccctgctggagcaccaaaccagcctaatgttgataagatcaccaaggattccgt cggcctgtcatggcagaaaccaaccaatgacggtggtggtaaactgaagggttatatcatagagaagaaaaagaaggatg gagactgggaggaggctaaggaagtaccagccaccgagaactcctgtacgatccctaacctgaaggagggtgatgagtat cagttccgtgtgaaggcagtcaatgctgccggaccaggcgagccaagcaggcccactaaagcagtagttgttgaggaaca gccagctaaacctgtcttaaacatgtctggagtgaaggacgtcacagtgaaggcaggtcagaacttccagattagtatac cttatactggcttccctaaaccaacagcaacctggattaacggggacgaagaaatcaaagattctcctagagtcgctctc aaggtactggatgaccaaattgtgttggccaatagtaaggctgaaagaggtgactcgggtaaatacaaggtgaccttgaa gaatgattctggacaggaatcaggaactctcaatgttaacgttctagacaagccagctgcacctgaaggtcctctgaccg ccactgacatcataggagaggagctcacccttaactggaaagcaccaaaagatgacggaggtgagaaaatcaacaactac atagtggagaaacgcaaggcaggatcaaaacaatggcagaaagtttccagctttatcaacagtccatcatgtaacgtcag gaacttggaaccaggaaccgagtatgagttccgtgtaatggctgagaacatgcagggagttagtgaaccgctcgaaacat caacaccaatactggccaaactaccttatgacactcctggagctcctggtaaaccagagtgtatagagttcactgaggat tcggcaacaatcacctgggatacgccaaggaaagatggtggaaatcccatcaaaggttacgttgtggagaaaaaagagaa aggagacaacagatggacaaaggctaatatctctgatgtacttggtaatgaatatacagtgaagggattaacagagggca aagagtatgaattccgagtggcagctataaataacgcaggtgtcggagattacagtcagtgctctgaggcaatcaaggct agaccagctccagtggcgccaaaagttaacagagatttcttccccaaagacatcacagtcaaaaaaggagaagaatttaa gatagccattccatacactggtaacccaataccatctacaaaatgggaacagggcaccaagcctgttgatgagggtggtc gtataaaattcgagaacactccaacggaacttaaactgatcaacaagaaggcagaattaggtgatgctggacgctacaca ctcactatggaaaatgagaagggcaaagatacatgtagtattaatgtcaaggtcgttgatgccccagcttcccctgaggg tccattagaagtcagtaatgtcacacctgattcctgtgtactcaactggaaagctccaaaggaggatggaggtagtccag tctctaactatgttgttgagaagaaagacgcaaggacaggtaaatgggaaccagtcagtaagtttgtacgcggtaccaac ttcgaagtgatgggactagaggagggacatgagtacatgttccgagtatctgctgagaacgagcatggagtgagcgaacc actagagacagccttaggaactgtggctcaacatccatacactgctcccggagcaccaagtaacccccatgttgtggatg tggacgagggctccgtcactttatcctggaataaacctaaagatgacggaggcaagaagatccaaggttacgtagtagag tacaaagacccaactagcggcagatggaaacctcacagtgatatacctgtcaatgatactgtcgctacagttgatggttt gaagaaggacaaggagtatgaattccgtgtacgtgcgaagaacatggccggcctgggagagcccagtggtgttgtcggac ctgtcacaccaaaacctaaatacactaaggccagtcctcctggtacaccagaggtggctgatatcggtaaaacattcgta gatctcaagtgggataaaccaaagaatgatggcggagctaaaatcactggttatgtagtagagaagaggcccaagggtgc tgataattgggttaaggccacagactatccttgtatagatcctaactatacagtaacaggattacccgaggggtcggagt gggagttcagggtcacagctgttaacgccgcaggcaacagtgaacccagcctggctacggctccaatcaaaataaaggag aaaatcgttggatctgcaccagaattcattaagaaaccgtttaacatgacggcagctctaggaggtgaagttcattttgt tgctcaagtccatggtaaacctttacctgatgtacaatggaaaatttcgatagattttgatgacgtcataatttctctgc ttcacgaccatcccaagcgggaagtaactctggttttcgaaaatagggaatatctgtgtttagtcaaagatttgaaaatg acccttccaatgccaggaaacaaagtacagacatggtgtaccagtaggtag |
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Protein
| Protein ID | pfu_aug2.0_28.1_26694.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26694.t1 MVPSYVVEKCEEGSDFWDKVPGVVMGTSHPVKGLKEGKKYKFRVKAENIYGAGEPLVTDKPTLAKNPFDTPDAPRDVTIP KYDKNSAEIHWKEPNSDGGNPIKGYIVEKKPKSGEWVPCNNFPVKDTNFTVMGLKEGQVLEFRVKAVNDGGEGKPSKATE PHKVRDQVFPAGAPNQPNVDKITKDSVGLSWQKPTNDGGGKLKGYIIEKKKKDGDWEEAKEVPATENSCTIPNLKEGDEY QFRVKAVNAAGPGEPSRPTKAVVVEEQPAKPVLNMSGVKDVTVKAGQNFQISIPYTGFPKPTATWINGDEEIKDSPRVAL KVLDDQIVLANSKAERGDSGKYKVTLKNDSGQESGTLNVNVLDKPAAPEGPLTATDIIGEELTLNWKAPKDDGGEKINNY IVEKRKAGSKQWQKVSSFINSPSCNVRNLEPGTEYEFRVMAENMQGVSEPLETSTPILAKLPYDTPGAPGKPECIEFTED SATITWDTPRKDGGNPIKGYVVEKKEKGDNRWTKANISDVLGNEYTVKGLTEGKEYEFRVAAINNAGVGDYSQCSEAIKA RPAPVAPKVNRDFFPKDITVKKGEEFKIAIPYTGNPIPSTKWEQGTKPVDEGGRIKFENTPTELKLINKKAELGDAGRYT LTMENEKGKDTCSINVKVVDAPASPEGPLEVSNVTPDSCVLNWKAPKEDGGSPVSNYVVEKKDARTGKWEPVSKFVRGTN FEVMGLEEGHEYMFRVSAENEHGVSEPLETALGTVAQHPYTAPGAPSNPHVVDVDEGSVTLSWNKPKDDGGKKIQGYVVE YKDPTSGRWKPHSDIPVNDTVATVDGLKKDKEYEFRVRAKNMAGLGEPSGVVGPVTPKPKYTKASPPGTPEVADIGKTFV DLKWDKPKNDGGAKITGYVVEKRPKGADNWVKATDYPCIDPNYTVTGLPEGSEWEFRVTAVNAAGNSEPSLATAPIKIKE KIVGSAPEFIKKPFNMTAALGGEVHFVAQVHGKPLPDVQWKISIDFDDVIISLLHDHPKREVTLVFENREYLCLVKDLKM TLPMPGNKVQTWCTSR |
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