Gene
| Gene Model ID | pfu_aug2.0_28.1_26696 |
|---|---|
| Locus | scaffold28.1 : 413177 ... 415565 : - |
| To GenomeBrowser | scaffold28.1:413177..415565 |
| Genes list of scaffold | scaffold28.1 |
| Synonym | pfu_aug1.0_40924.1_05151 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_28.1_26696.t1 | 2 | 1 | fn3 | 15 | 30 | 5.5e-16 | 58.4 | 1.4 | 7000.0 | -2.8 |
| pfu_aug2.0_28.1_26696.t1 | 2 | 2 | fn3 | 49 | 127 | 5.5e-16 | 58.4 | 2.6e-19 | 1.3e-15 | 57.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_28.1_26696.t1 | gi|242010244|ref|XP_002425880.1| | titin, putative [Pediculus humanus corporis] | 1.0e-33 |
| pfu_aug2.0_28.1_26696.t1 | gi|755892965|ref|XP_011295133.1| | PREDICTED: twitchin [Musca domestica] | 3.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_28.1_26696.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26696.t1 atgacgcccgatcgtgcccagcttaggattcctgccgcagagagaggagactcaggagagtatgaactcactcttagtaa cgaagttggaacagaagttatacctgtagctgttagggtattagatcgccctggtaagccagagggacccttggatgtgg tggatgtttactcagatcgttgttccttactgtgggacagacccaaggacgatggaggaagtccaatcaaacactacgtc gtggagaagaaagattccgaggctaataactggcaggaggaatgtacgacggaggatctggaaatagacgtgactggact acaggagggacacaggtatacattccaggtcaaggccgtcaacgaccaaggtgtcagcgacccactacctgctgatggtg aaatcatagctaaagatccatgggaatggaattccaccattttcactatccatcagacccgccttcagaacctgaggtta ttgattatgacaaggactacgctgagttgtcatggcaaccaccagcacgtgacggtggagctccaatag |
|
Protein
| Protein ID | pfu_aug2.0_28.1_26696.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26696.t1 MTPDRAQLRIPAAERGDSGEYELTLSNEVGTEVIPVAVRVLDRPGKPEGPLDVVDVYSDRCSLLWDRPKDDGGSPIKHYV VEKKDSEANNWQEECTTEDLEIDVTGLQEGHRYTFQVKAVNDQGVSDPLPADGEIIAKDPWEWNSTIFTIHQTRLQNLRL LIMTRTTLSCHGNHQHVTVELQ |
|