Gene
| Gene Model ID | pfu_aug2.0_28.1_26697 |
|---|---|
| Locus | scaffold28.1 : 415617 ... 428705 : - |
| To GenomeBrowser | scaffold28.1:415617..428705 |
| Genes list of scaffold | scaffold28.1 |
| Synonym | pfu_aug1.0_40924.1_05151 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_28.1_26697.t2 | 3 | 1 | I-set | 22 | 114 | 3.4e-39 | 132.5 | 5.6e-13 | 1.0e-09 | 38.0 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 1 | V-set | 24 | 104 | 2.8e-20 | 72.3 | 3.4e-09 | 6.3e-06 | 26.0 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 1 | Ig_2 | 31 | 111 | 2.9e-22 | 78.5 | 9.1e-10 | 1.7e-06 | 28.0 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 1 | Ig_3 | 33 | 101 | 1.5e-08 | 35.0 | 0.0025 | 4.7 | 7.7 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 1 | C1-set | 34 | 102 | 1.2e-07 | 31.6 | 1.3e-05 | 0.024 | 14.6 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 1 | ig | 39 | 102 | 2.2e-19 | 69.3 | 1.4e-05 | 0.026 | 14.6 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 2 | I-set | 121 | 196 | 3.4e-39 | 132.5 | 4.2e-16 | 7.7e-13 | 48.1 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 2 | V-set | 127 | 196 | 2.8e-20 | 72.3 | 5.1e-06 | 0.0095 | 15.8 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 2 | Ig_2 | 134 | 199 | 2.9e-22 | 78.5 | 2.6e-07 | 0.00049 | 20.1 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 2 | ig | 135 | 193 | 2.2e-19 | 69.3 | 1.2e-07 | 0.00023 | 21.2 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 2 | Ig_3 | 138 | 164 | 1.5e-08 | 35.0 | 0.098 | 180.0 | 2.7 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 2 | C1-set | 144 | 194 | 1.2e-07 | 31.6 | 0.036 | 67.0 | 3.5 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 3 | I-set | 210 | 288 | 3.4e-39 | 132.5 | 2.3e-15 | 4.3e-12 | 45.7 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 3 | Ig_3 | 219 | 283 | 1.5e-08 | 35.0 | 5.7e-07 | 0.0011 | 19.4 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 3 | V-set | 220 | 296 | 2.8e-20 | 72.3 | 3.7e-09 | 6.8e-06 | 25.9 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 3 | Ig_2 | 221 | 287 | 2.9e-22 | 78.5 | 2.4e-09 | 4.5e-06 | 26.6 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 3 | C1-set | 222 | 290 | 1.2e-07 | 31.6 | 6.8e-05 | 0.13 | 12.3 |
| pfu_aug2.0_28.1_26697.t2 | 3 | 3 | ig | 223 | 283 | 2.2e-19 | 69.3 | 7.6e-10 | 1.4e-06 | 28.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_28.1_26697.t2 | gi|676466130|ref|XP_009057467.1| | hypothetical protein LOTGIDRAFT_121852 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_28.1_26697.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26697.t1 atggaagaccagaagacgatggagggaaccaagaaagttcagttctcatgtaaattcttcacagctcgtggcaagcctaa aatcagctggttcaagaacaagttggagattttccccggccataaatatcactttgacaatgaaggtgatgagtatatac tgacaattaacaatatcaaactggaggacggaggcaaatactccatacagtgtaacaagtccaaaaccggggcatggttg tatgttgaagctaaagaacctgaatatgaatttacacagaaactccctgaaaaatacagcgttaccaagagaaaggaagc cactcttgagtgctttatttctgatccaagggcaaaggtcaaatggtacaaaaatggaaatctcatagactatacacaag gcaagatggagatacagagaagagagaaccgttgtcttctccgcattatgaatgctgaccctgatgatgaggcagaatat tcatgtgaatgtggaaaagccaagacgtcatgtaaactcagtgtcactgaaccagaatgggctttcatgaagcagcttga ggacgtagagggaatggagagagagaaggccatttttgagtgtgatgtcaacgacccggaggctgaagtacattggtaca aagctgacggcaaggaagttgtaccaggtggtaaatatgagatccagaaagatggatttaagcgtcgcctgatcgtgaag aattgtcacatgagagatgacggcaaatatacatgtaaagttttggataaggaaacatcagcctgtctgttcgttgaacc tgatatcaagttcttcaagaagttagaaaacaagagagagaaagagaagggtacacttgtactggagtgtaaggcagcta acccacataaccaaccggttaaatggttaaaggacggcaaacctatcaacaaagatgatccgagagtagaagtagtaagg aagggagagacccacaagcttgtgatttctaacttgaagagagaggacgcaggtctatatgcctgtcaggttggagagag atctactaaatctgacgtcatcgtcgacgagtaaatttttcaaaaggaattaaaatcatgcccaagccacccaaggtag |
|
| Transcript ID | pfu_aug2.0_28.1_26697.t2 |
| Definition | - |
>pfu_aug2.0_28.1_26697.t2 atgttgaagggaaaaagaatgcaccaagaaaaattgcaaaagcattctaaagaacctgaatatgaatttacacagaaact ccctgaaaaatacagcgttaccaagagaaaggaagccactcttgagtgctttatttctgatccaagggcaaaggtcaaat ggtacaaaaatggaaatctcatagaccgaaaaataatcaaagaagagtatacacaaggcaagatggagatacagagaaga gagaaccgttgtcttctccgcattatgaatgctgaccctgatgatgaggcagaatattcatgtgaatgtggaaaagccaa gacgtcatgtaaactcagtgtcactgaaccagaatgggctttcatgaagcagcttgaggacgtagagggaatggagagag agaaggccatttttgagtgtgatgtcaacgacccggaggctgaagtacattggtacaaagctgacggcaaggaagttgta ccaggtggtaaatatgagatccagaaagatggatttaagcgtcgcctgatcgtgaagaattgtcacatgagagatgacgg caaatatacatgtaaagttttggataaggaaacatcagcctgtctgttcgttgaacctgatatcaagttcttcaagaagt tagaaaacaagagagagaaagagaagggtacacttgtactggagtgtaaggcagctaacccacataaccaaccggttaaa tggttaaaggacggcaaacctatcaacaaagatgatccgagagtagaagtagtaaggaagggagagacccacaagcttgt gatttctaacttgaagagagaggacgcaggtctatatgcctgtcaggttggagagagatctactaaatctgacgtcatcg tcgacgagtaaatttttcaaaaggaattaaaatcatgcccaagccacccaaggtag |
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Protein
| Protein ID | pfu_aug2.0_28.1_26697.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26697.t1 MEDQKTMEGTKKVQFSCKFFTARGKPKISWFKNKLEIFPGHKYHFDNEGDEYILTINNIKLEDGGKYSIQCNKSKTGAWL YVEAKEPEYEFTQKLPEKYSVTKRKEATLECFISDPRAKVKWYKNGNLIDYTQGKMEIQRRENRCLLRIMNADPDDEAEY SCECGKAKTSCKLSVTEPEWAFMKQLEDVEGMEREKAIFECDVNDPEAEVHWYKADGKEVVPGGKYEIQKDGFKRRLIVK NCHMRDDGKYTCKVLDKETSACLFVEPDIKFFKKLENKREKEKGTLVLECKAANPHNQPVKWLKDGKPINKDDPRVEVVR KGETHKLVISNLKREDAGLYACQVGERSTKSDVIVDEXIFQKELKSCPSHPR |
|
| Protein ID | pfu_aug2.0_28.1_26697.t2 |
| Definition | - |
>pfu_aug2.0_28.1_26697.t2 MLKGKRMHQEKLQKHSKEPEYEFTQKLPEKYSVTKRKEATLECFISDPRAKVKWYKNGNLIDRKIIKEEYTQGKMEIQRR ENRCLLRIMNADPDDEAEYSCECGKAKTSCKLSVTEPEWAFMKQLEDVEGMEREKAIFECDVNDPEAEVHWYKADGKEVV PGGKYEIQKDGFKRRLIVKNCHMRDDGKYTCKVLDKETSACLFVEPDIKFFKKLENKREKEKGTLVLECKAANPHNQPVK WLKDGKPINKDDPRVEVVRKGETHKLVISNLKREDAGLYACQVGERSTKSDVIVDEXIFQKELKSCPSHPR |
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