Gene
| Gene Model ID | pfu_aug2.0_28.1_26700 |
|---|---|
| Locus | scaffold28.1 : 541665 ... 549095 : - |
| To GenomeBrowser | scaffold28.1:541665..549095 |
| Genes list of scaffold | scaffold28.1 |
| Synonym | pfu_aug1.0_4815.1_37984 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_28.1_26700.t1 | 1 | 1 | UPF0160 | 15 | 335 | 0.0 | 445.9 | 0.0 | 0.0 | 445.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_28.1_26700.t1 | gi|585706356|ref|XP_002740515.2| | PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_28.1_26700.t1 | gi|556945630|ref|XP_005986186.1| | PREDICTED: UPF0160 protein MYG1, mitochondrial isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_28.1_26700.t1 | gi|524913773|ref|XP_005111711.1| | PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_28.1_26700.t1 | gi|348528813|ref|XP_003451910.1| | PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_28.1_26700.t1 | gi|548407978|ref|XP_005740129.1| | PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Pundamilia nyererei] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_28.1_26700.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26700.t1 atgtcagtgcagcctccaacaaagaagttttgctccaggatgaaaatagccactcataacggaagttttcactgtgatga agtcctggcatgctatttgctgcgacgtctaccagaatacaaagatgcggaaatcgttaggaccaggaatcctgaactga ttgacagtgcggatatagtagttgacgtaggtggtgtgtttgatgcttcaaagaaaagatttgatcatcatcagaggact ttcagtgacaccatgaacagtctaaatcccaccaagaaatggacgaccaagctaagtagtgccggactcatatactgcca ttttggacaaaggattgtggccgatatcctggaacttaaagaagatgacccggtcacaggaattatttttgataaagtct atgagaactttgtggaggagatagatgccatagataatggagtaaatcaatatgacggagagccaaagtatcacatttcc acgactatcagcagcagggtgggcaaccttaatcctttatggaatgaggacaatgtggatgagatgtccagatttctgaa agctatgacaatggtaggagatgagtttttagacagagtgctatactataaaaaggcgtggctccctgcccgagaactgg ttgagacagcagtacaaaatcgtcatgaagttgatccaagtggagaaattgttgtattcacatctgggggctgcccatgg aaggaccatctatttaaccttgaagaagaactaaaaatagagccgaaaatcaagtacatcctctacacagaccagaatgg caagtggagaattcagtgtgttcctgtcagattgggatcttttgaaaataggctttcaatactggaggaatggagaggac ttcgtgatagtgcgctatcggaaaaatcaggaatcccaggatgcatctttgtacatgcctctggttttataggaggaaat gacacttacgagggtgtgctacaaatggccaagcttagcttaaaacagcagcagtcccagtga |
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Protein
| Protein ID | pfu_aug2.0_28.1_26700.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26700.t1 MSVQPPTKKFCSRMKIATHNGSFHCDEVLACYLLRRLPEYKDAEIVRTRNPELIDSADIVVDVGGVFDASKKRFDHHQRT FSDTMNSLNPTKKWTTKLSSAGLIYCHFGQRIVADILELKEDDPVTGIIFDKVYENFVEEIDAIDNGVNQYDGEPKYHIS TTISSRVGNLNPLWNEDNVDEMSRFLKAMTMVGDEFLDRVLYYKKAWLPARELVETAVQNRHEVDPSGEIVVFTSGGCPW KDHLFNLEEELKIEPKIKYILYTDQNGKWRIQCVPVRLGSFENRLSILEEWRGLRDSALSEKSGIPGCIFVHASGFIGGN DTYEGVLQMAKLSLKQQQSQ |
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