Gene
| Gene Model ID | pfu_aug2.0_28.1_26701 |
|---|---|
| Locus | scaffold28.1 : 559600 ... 611559 : + |
| To GenomeBrowser | scaffold28.1:559600..611559 |
| Genes list of scaffold | scaffold28.1 |
| Synonym | pfu_aug1.0_4815.1_37985 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_28.1_26701.t1 | 1 | 1 | BTB | 658 | 754 | 4.0e-11 | 42.8 | 5.5e-14 | 1.4e-10 | 41.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_28.1_26701.t1 | gi|743740973|ref|XP_010964980.1| | PREDICTED: zinc finger protein 554 isoform X2 [Camelus bactrianus] | 1.0e-11 |
| pfu_aug2.0_28.1_26701.t1 | gi|560906090|ref|XP_006179389.1| | PREDICTED: zinc finger protein 554 [Camelus ferus] | 2.0e-11 |
| pfu_aug2.0_28.1_26701.t1 | gi|471410919|ref|XP_004387016.1| | 3.0e-11 | |
| pfu_aug2.0_28.1_26701.t1 | gi|744623408|ref|XP_010998182.1| | PREDICTED: zinc finger protein 554 [Camelus dromedarius] | 6.0e-11 |
| pfu_aug2.0_28.1_26701.t1 | gi|594682999|ref|XP_007189057.1| | PREDICTED: zinc finger protein 596-like [Balaenoptera acutorostrata scammoni] | 2.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_28.1_26701.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26701.t1 atggcgtgtaggatggtgcagaggcggcagagtgagatgaggagggacatggcccgccgtcaggcttgtaggagggggtc cattcctactcactttccgtccattcctggatgtgcctttcctaaaccaatcattgagcgcaggttatcacggtacgatg ctaatgaatttgagggtgggatcaaatcccttattcaggccatatcagttggagaactgtcgatcgtggaatcaatcatg gaggaaatcaaagacactgttaccttgttaaataaagacatgtttcatgttatcatggctgcggtgaagactggtgatcc acttattgtttccagagttatgcaagaagttaaagccaggcgatactttcctgttaggtgtttgacctctgtatttatgg aggctatccgtaccaagaacgttgatatattaagaagtgttaaatctataagacccaaaatattcattccagaagaagat gtcgttcaacttgtttttgaagctgtgaatactgatgaccctgctattgttctagagcttgtaaagagccgacacttcaa aaagaaactaagcagtgagaatgcattccaagtcttaacaaaagcgcttagttcatcagacccttctattatatcctcag tcgtctctcatttcaaaccaaagaaccagttatccgtggagcacaaacttacgatattgcgttatgccataaagatccat catctacaaactgtccagttttgttttagattaaaatcatttcttctgcctgaagacgctaaggaaattctattggcagc tgcgaggtcatctcccgatgtcttcaattttgtctgtgatactctacatccaattctgaacgaaatacccatccaacagt tactcagaatcgcgatgcaggcgaagaaagtcggaatagtacaaaaaataatgcaaaaattcaaaattttagatcaaact ttaatagaacttcttttattacatttgcgaggatatgatcccgatgagaatattttgattgtaatgcttcatgaaataca cgttctatcgcattccattgcaacagagatcttatctgcgatcataattcatgattttcttaatgcagtgtcggctttcc attgggattcttgtcggagaaaccttccaaatacaatcgtagcagctctcgttcatgcaacagatttttcaagaaattca gtttccgaggacacatcggaaaacgatatcggagagagatcatctagcgaaacaggaagcagaaaatcacgtgatcattc ctccgccataagtagtaacatcggaaatagtcaatcacgtgatcactctgcagttatacaaaaaattattttcaaatgta gatcattcgatagttgtatcgttaaacaaataattatggtattatctcttaacaagaatataggatgcctagatattttt cttggatcgttaaacaatctttcggaggatgatgcacgtgaagtcatctatttcgtcgctcagtctttggacaaggtcga tgtggttgagattctagtcaaatattgcaagtcaatatcactggagaaccttgatgaatgtatacgtcgttgtcaacatg ataatgttaggcagcttttaatattgcacaggcgccagattgtgaccgagcaatttcggaagcactatggagaagttctg aaagaggtacatttcgaatatgattccaagaaagagataacccttgtggcgatctttggtcatcgtccaaaggttcttat gagtgactttnttaattccgttttactagattgtagattcacactgcaacagaagaactccaataacagaaaattcagcg tccgaaaatattcaattaggccagtctattcttccctccatccagtccatatcacaatggcgtatcacaaggtttacatg aatcagatattctcgacttctctgactggccagttagcattcatgtggcggaaggagcttctttgtgatgctgtcatcaa agctggaaatttcagtacaaaggctcatcgtctagtcatgatagcagcttgtcctatgctacagcacatggagaatgctt ccctcggctctcatctggaagttcgcctttcctctgacatcagtgtgacatcaatcaaaatgttcctgcaatatctgtat gagggctttatgaagttaacggaggagaattataaagaaattgagaaaatcagcaaagttttacaagttgacagtataac caaatgttgcattgattttgccaaatgcttaagacaacagagtgatcagcattatcctgatgtcaatgaatttggcatac aagagcaggcagaattcaaatttgttaaagcaactgatcttgagaaaacattttcttcagcagataatacaggtgacttt ggctcttcaaataagcgacccagagtacagtcaggtagacgggagtccacaggattggactacccatcaagaaattatca agaagataggagagcaggttttggctcctcaagtcagaatcaacagtcaacgcattcagaacctattgaaattttagatg atggcgtagaagttataaattcagagccagcacagagggatgaggaaggctggccggtaccatcaagtcaacccccttta cagcacagtatgggggtaggtgtcagtacccaatctgggacacagcctgatgtgagggttataagtatatctgatcatga tgtctcaattcctgtctccacaccgcctatcagccagacgtctcaaccacaggaaactccacaacatacaggttttacgt ctcatgccagtaccaaagtaacagagcagcttgggacaatacagcctatgactggtatagatgtaccagtacaacaaaga gtttctcagtcctcacccttcaccaccagtactccgtgccagcttgtaccagtgtcggccaatcaaagaaagccattcgc tgcaggaaatgaatctcaactgaatgtttctaaagatgtagatccaagcgtatatactgttgggaattaccatggtgttc ctgagtctaatttggttgacaccagtgatacatcaggtttgacgcaagtacctaccaccagtgaaggtagaaatgaaagt tcttatatggaacatgatcaaggcttccaagattcagaaatcagtattattaaagtagaacatttgtctggaggagagag tatagaaatggggcttgaggaaggtagaccacctgatcaatcagaaatgatatacgtgcaaaaagctccctctagtgaca atgaaggggaaggggaagaatactctaacgaagcgagcaatatgatagaaggagcgtcgggaatacaaaatacttcatta cagcaggatatcaaagaccagcatatgtatcagtgcagagtctgtggtggggttatggatagtgcagacactcttctaaa acacttacagtcccatgctagggaggaaactagggaggaaactagggaaaggaatccagttacatcggcaccaaatagga ggtattcagatgaacgtaaaaagaagagacctgactggagtccttatacatgtggagtatgtggtgaatcttgtaaatct ataggcaaattcttagtgcacgctagagtccattcagaccagacagctattatgtgtccaggatgtaacaagatattcaa tgacagatctgaacttgagggacataattgttcaagtacagtacaaaaaagatgcagaaaatgtaatggtttattttacc aagtacatagacatgaaagggagtgtaatgcttcgagaccgttcatctgcaagttctgttctaggtctttccagcaaaag aggaaagttaacgccaaagattcaaatcctacgatgtag |
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Protein
| Protein ID | pfu_aug2.0_28.1_26701.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_28.1_26701.t1 MACRMVQRRQSEMRRDMARRQACRRGSIPTHFPSIPGCAFPKPIIERRLSRYDANEFEGGIKSLIQAISVGELSIVESIM EEIKDTVTLLNKDMFHVIMAAVKTGDPLIVSRVMQEVKARRYFPVRCLTSVFMEAIRTKNVDILRSVKSIRPKIFIPEED VVQLVFEAVNTDDPAIVLELVKSRHFKKKLSSENAFQVLTKALSSSDPSIISSVVSHFKPKNQLSVEHKLTILRYAIKIH HLQTVQFCFRLKSFLLPEDAKEILLAAARSSPDVFNFVCDTLHPILNEIPIQQLLRIAMQAKKVGIVQKIMQKFKILDQT LIELLLLHLRGYDPDENILIVMLHEIHVLSHSIATEILSAIIIHDFLNAVSAFHWDSCRRNLPNTIVAALVHATDFSRNS VSEDTSENDIGERSSSETGSRKSRDHSSAISSNIGNSQSRDHSAVIQKIIFKCRSFDSCIVKQIIMVLSLNKNIGCLDIF LGSLNNLSEDDAREVIYFVAQSLDKVDVVEILVKYCKSISLENLDECIRRCQHDNVRQLLILHRRQIVTEQFRKHYGEVL KEVHFEYDSKKEITLVAIFGHRPKVLMSDFXNSVLLDCRFTLQQKNSNNRKFSVRKYSIRPVYSSLHPVHITMAYHKVYM NQIFSTSLTGQLAFMWRKELLCDAVIKAGNFSTKAHRLVMIAACPMLQHMENASLGSHLEVRLSSDISVTSIKMFLQYLY EGFMKLTEENYKEIEKISKVLQVDSITKCCIDFAKCLRQQSDQHYPDVNEFGIQEQAEFKFVKATDLEKTFSSADNTGDF GSSNKRPRVQSGRRESTGLDYPSRNYQEDRRAGFGSSSQNQQSTHSEPIEILDDGVEVINSEPAQRDEEGWPVPSSQPPL QHSMGVGVSTQSGTQPDVRVISISDHDVSIPVSTPPISQTSQPQETPQHTGFTSHASTKVTEQLGTIQPMTGIDVPVQQR VSQSSPFTTSTPCQLVPVSANQRKPFAAGNESQLNVSKDVDPSVYTVGNYHGVPESNLVDTSDTSGLTQVPTTSEGRNES SYMEHDQGFQDSEISIIKVEHLSGGESIEMGLEEGRPPDQSEMIYVQKAPSSDNEGEGEEYSNEASNMIEGASGIQNTSL QQDIKDQHMYQCRVCGGVMDSADTLLKHLQSHAREETREETRERNPVTSAPNRRYSDERKKKRPDWSPYTCGVCGESCKS IGKFLVHARVHSDQTAIMCPGCNKIFNDRSELEGHNCSSTVQKRCRKCNGLFYQVHRHERECNASRPFICKFCSRSFQQK RKVNAKDSNPTM |
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