Gene
| Gene Model ID | pfu_aug2.0_2805.1_18924 |
|---|---|
| Locus | scaffold2805.1 : 14239 ... 33885 : - |
| To GenomeBrowser | scaffold2805.1:14239..33885 |
| Genes list of scaffold | scaffold2805.1 |
| Synonym | pfu_aug1.0_8466.1_38762 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| synaptotagmin 1-like isoform x1 | GO:0000149 GO:0005215 GO:0005509 GO:0016079 GO:0030054 GO:0030285 GO:0030672 GO:0035005 GO:0045955 GO:0046854 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2805.1_18924.t1 | 2 | 1 | C2 | 109 | 196 | 0.0 | 186.5 | 2.7e-32 | 5.0e-29 | 99.9 |
| pfu_aug2.0_2805.1_18924.t1 | 2 | 2 | C2 | 243 | 330 | 0.0 | 186.5 | 6.9e-28 | 1.3e-24 | 85.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2805.1_18924.t1 | gi|676492396|ref|XP_009065903.1| | synaptotagmin 1 variant [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2805.1_18924.t1 | gi|676492393|ref|XP_009065902.1| | synaptotagmin 1 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2805.1_18924.t1 | gi|62512144|sp|P41823.2|SY65_APLCA | Synaptotagmin-1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2805.1_18924.t1 | gi|347543823|ref|NP_001191553.1| | synaptotagmin-1 isoform 1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2805.1_18924.t1 | gi|325297114|ref|NP_001191565.1| | synaptotagmin-1 isoform 2 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2805.1_18924.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2805.1_18924.t1 atggcagaaggacgagtgccgtggtgggccatactgagcattgtagtgggaacattgctggtcttcgtttgctgttgtta ttgtatgtgtaaaagatgctgcaagaaacgcaaaaagaaggatgtcaaaaaaggactcaaaaatgccgtcaatctgaaag acgtagtctccataggctcctcactcaaaaaggaaaaaatccaaccagatttagaagaacttgagggagcaatggaggat aatgaagacaatgaaagtacgaaatcagaggtcaaactcggaaaacttcagttccagctagactatgagtttcaaaaagg agagttgacagtgggtgtgattcaggcagccgatctaccgggaatggatatgtccggtacatccgacccctacgtcaaag tttacctcctacctgacaagaaaaagaaatacgagaccaaggttcacagaaaaactctaaatccagtatttaatgaaact ttcacatttaagaatgtcccatttgctgaaatcagtacaaagacattgacgtttgcggtatatgactttgatagattttc gaagcatgatcaaataggtcaagtacagattccacttaacactgtggatctatgtcaggttttagaagagtggcgggacc taaccagccccgataatgagtcggaaaaagagaacaagctaggagatatatgcttctccctgcggtacgtacccacggcc ggtaaattaacagtcgttatactggaagccaaaaacctcaaaaagatggacgtgggaggattgtcagatccctatgttaa gatttctatgatgttaaatggcaagcgggtaaagaagaagaaaacgactataaagaagtgtacactgaacccatactata acgaatcatttacgtttgaagttccgtttgagcaaatccagaaagtccagttatacatcacagtggtagattatgacaga attggcacatcggaacctataggacgcgtggtccttggctgtaactccagcggcactgaactccgacactggagcgacat gttggccaatccaaggcggcccattgctcagtggcacacgttacaggaagtgccagagaagagctaa |
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Protein
| Protein ID | pfu_aug2.0_2805.1_18924.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2805.1_18924.t1 MAEGRVPWWAILSIVVGTLLVFVCCCYCMCKRCCKKRKKKDVKKGLKNAVNLKDVVSIGSSLKKEKIQPDLEELEGAMED NEDNESTKSEVKLGKLQFQLDYEFQKGELTVGVIQAADLPGMDMSGTSDPYVKVYLLPDKKKKYETKVHRKTLNPVFNET FTFKNVPFAEISTKTLTFAVYDFDRFSKHDQIGQVQIPLNTVDLCQVLEEWRDLTSPDNESEKENKLGDICFSLRYVPTA GKLTVVILEAKNLKKMDVGGLSDPYVKISMMLNGKRVKKKKTTIKKCTLNPYYNESFTFEVPFEQIQKVQLYITVVDYDR IGTSEPIGRVVLGCNSSGTELRHWSDMLANPRRPIAQWHTLQEVPEKS |
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