Gene
| Gene Model ID | pfu_aug2.0_281.1_03920 |
|---|---|
| Locus | scaffold281.1 : 55686 ... 62656 : + |
| To GenomeBrowser | scaffold281.1:55686..62656 |
| Genes list of scaffold | scaffold281.1 |
| Synonym | pfu_aug1.0_2309.1_15775 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_281.1_03920.t1 | 3 | 1 | OATP | 48 | 246 | 0.0 | 255.8 | 3.0e-25 | 1.5e-21 | 76.1 |
| pfu_aug2.0_281.1_03920.t1 | 3 | 2 | OATP | 248 | 296 | 0.0 | 255.8 | 1.1e-18 | 5.6e-15 | 54.4 |
| pfu_aug2.0_281.1_03920.t1 | 3 | 3 | OATP | 317 | 538 | 0.0 | 255.8 | 2.90069e-42 | 1.5e-38 | 132.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_281.1_03920.t1 | gi|558182408|ref|XP_006127571.1| | PREDICTED: solute carrier organic anion transporter family member 2B1 isoform X4 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_281.1_03920.t1 | gi|242025540|ref|XP_002433182.1| | organic anion transporter, putative [Pediculus humanus corporis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_281.1_03920.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_281.1_03920.t1 atgggtacgaatgtggaaagtaatggagttcaatacaaaaagaaacaggagtttgacaagcttgacggcgacgatgaccc agacacagaatgtggggtcggaagcttccgcccgagttttctccaatgtttcgcgaatgttaatgcctttgtgggtacct acagctttatagggatgatctcacagactctgtctgtttatgtaaattctcaggtacccgccttggagaaacaattcggt ttgaacagtgcagaaagtggtctggtgatgagcttcaatgatatagggttcttcaccacaattttgtttgctgcttccat tgtccgttttgtacatatccctcgttttatttatctttgtatgatcctatatgggttttcgggaatcatttgcagtatcc ctcattttattgcccaaggacaaggtttacttgataacttttacatagaaagcagtatagtggttgattccaataatact atgcctaaggaatcaaagccagacttactttgtgatgctacaagaattctcaagaacatctctgacctgggaaattgtgc cactgactcagaatcgaaacttgcacagctgatatcccccagcatttccatcaagaaaacagcgttaggtctaataggca ttggcatggtcctccaaggtataggaaaggcgccacgtggagcggctttcactgtgtatgtagatgataatgtagataga agaaagactgggttctatgcagacgttgacatgaacccaagagatccacgctggataggcgcctggtggctgggatttct agtttttggagccgcctccgtggtcctgtctactgccctcctcttctttcccagacggttaaaacagtctgagaaagaca aagcaaaaggaaagaaaatcattcgaaccgaagaattccatggaacattaaaagaaaagataaaagcgggaacaaatctg tcatcggttgcactgggtgccttttttggcggcttgataacaagaaggattccaatgactccaagaaatggcttcaaggt cattttaatcctcttcgtcattcacaatgctctttttgctgctttattcttcctcggctgtgatcagcaagaaattaaag gaccaacaggaattcacaaatttgcaacgagtatttcaaatgaatgttcctcgaaatgtcaatgtgacagcgatgatttc tttccaatctgtggatcagacggtataaattatcattcgccgtgctacgctggatgtgacgagagtgttcgtggaggaag gatgtattcaaactgcacatgtacaccagatggaaaggcaacagcaggtttctgtaagacggactgtgctatgatttatc cttgggccattgtcaatttcctatcttctgtggctggcgccatgaaaattatgcctaattacatcctaatgatcagatgc gtgaaagatactgataaggccacggctctaggcctaagctccttcttgacatcttcccttggctgggccttatcgccaat actttacggaaaaatcgtcgacacgacttgtcttatttggcaatcatcatgtgcaggacacggtgcttgtgaatattacg acatcggggacttccgttggaagttccatactttcggttttgttttcaaaatgattgctttattaagttcattgttcgca ctatggaaagtttggaactggaagcagtgggacgcagaagccaaaagtcaccatgagaaaacagtccatccaaccgacga aaaacaaaatatgattgccgatcagaagggacaaagcgacgatactcaaaaccttaaccaactttga |
|
Protein
| Protein ID | pfu_aug2.0_281.1_03920.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_281.1_03920.t1 MGTNVESNGVQYKKKQEFDKLDGDDDPDTECGVGSFRPSFLQCFANVNAFVGTYSFIGMISQTLSVYVNSQVPALEKQFG LNSAESGLVMSFNDIGFFTTILFAASIVRFVHIPRFIYLCMILYGFSGIICSIPHFIAQGQGLLDNFYIESSIVVDSNNT MPKESKPDLLCDATRILKNISDLGNCATDSESKLAQLISPSISIKKTALGLIGIGMVLQGIGKAPRGAAFTVYVDDNVDR RKTGFYADVDMNPRDPRWIGAWWLGFLVFGAASVVLSTALLFFPRRLKQSEKDKAKGKKIIRTEEFHGTLKEKIKAGTNL SSVALGAFFGGLITRRIPMTPRNGFKVILILFVIHNALFAALFFLGCDQQEIKGPTGIHKFATSISNECSSKCQCDSDDF FPICGSDGINYHSPCYAGCDESVRGGRMYSNCTCTPDGKATAGFCKTDCAMIYPWAIVNFLSSVAGAMKIMPNYILMIRC VKDTDKATALGLSSFLTSSLGWALSPILYGKIVDTTCLIWQSSCAGHGACEYYDIGDFRWKFHTFGFVFKMIALLSSLFA LWKVWNWKQWDAEAKSHHEKTVHPTDEKQNMIADQKGQSDDTQNLNQL |
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