Gene
| Gene Model ID | pfu_aug2.0_281.1_03925 |
|---|---|
| Locus | scaffold281.1 : 143491 ... 152425 : - |
| To GenomeBrowser | scaffold281.1:143491..152425 |
| Genes list of scaffold | scaffold281.1 |
| Synonym | pfu_aug1.0_20485.1_62011 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| atp-binding cassette sub-family g member 2-like | GO:0000166 GO:0016887 GO:0043190 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_281.1_03925.t1 | 2 | 1 | ABC_tran | 80 | 229 | 2.8e-24 | 85.9 | 1.2e-26 | 1.5e-23 | 83.6 |
| pfu_aug2.0_281.1_03925.t1 | 2 | 1 | AAA_21 | 91 | 113 | 5.5e-09 | 36.4 | 2.5e-06 | 0.003 | 17.5 |
| pfu_aug2.0_281.1_03925.t1 | 2 | 2 | AAA_21 | 177 | 257 | 5.5e-09 | 36.4 | 7.6e-06 | 0.0093 | 15.9 |
| pfu_aug2.0_281.1_03925.t1 | 4 | 1 | ABC2_membrane | 252 | 286 | 3.8e-26 | 91.5 | 0.48 | 590.0 | -0.6 |
| pfu_aug2.0_281.1_03925.t1 | 2 | 2 | ABC_tran | 313 | 366 | 2.8e-24 | 85.9 | 1.1 | 1300.0 | -0.5 |
| pfu_aug2.0_281.1_03925.t1 | 4 | 2 | ABC2_membrane | 385 | 412 | 3.8e-26 | 91.5 | 0.17 | 210.0 | 0.9 |
| pfu_aug2.0_281.1_03925.t1 | 4 | 3 | ABC2_membrane | 407 | 557 | 3.8e-26 | 91.5 | 3.1e-29 | 3.8e-26 | 91.5 |
| pfu_aug2.0_281.1_03925.t1 | 4 | 4 | ABC2_membrane | 592 | 607 | 3.8e-26 | 91.5 | 0.75 | 920.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_281.1_03925.t1 | gi|676442130|ref|XP_009049710.1| | hypothetical protein LOTGIDRAFT_141832 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_281.1_03925.t1 | gi|524908553|ref|XP_005109370.1| | PREDICTED: ATP-binding cassette sub-family G member 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_281.1_03925.t1 | gi|384407065|gb|AFH89643.1| | 0.0 | |
| pfu_aug2.0_281.1_03925.t1 | gi|585679118|ref|XP_006819458.1| | PREDICTED: ATP-binding cassette sub-family G member 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_281.1_03925.t1 | gi|260802796|ref|XP_002596278.1| | hypothetical protein BRAFLDRAFT_202873 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_281.1_03925.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_281.1_03925.t1 atgcaggagggtcattttgcatttttacccaaacaggagaggctgttaaatccaggagaagattcatatggatctatgac caccaaaatgaacggcggacacactgtggatgtggatgtggagaggcaattttcaaagagcggagatgtgaagggatcta ccatttcagctcatgacgtgcattacagtgttatggtcagggacaagccttgtggagacaggaggaggaaggacatcctg aaaaacattgactgcatcttcaagccaggaatgaacgcaattttagggccaacgggtagtggaaaatcatcgttactgga tatattggcagggaggaaggaccctgctggtttacaggggacaatacttatagacggggcacctccccctgataatttca aatgcatggtgggatatgttgtgcaggatgacgtagtgatgggaaccctgacagtgagagagaacttcgccttttcagct gctctaagactaccaggtagcatatcagacaatgagaggaaagagagagtggataatgttataagtgaactgggactctc tgaatgtgctgataccaaggtagggacagagtttatcagaggagtatcagggggagagagaaagaggaccaacattggta tggagttgattatctcccctcccgtcctatttctggatgaaccaacaacaggattggacgccaatactgccaactctgtc atgttgttactcagaaggttggccctgaggggaagaactatcatattttccattcaccagcctcgttactccatttatcg tctatttgatactctgatgatgttgtctctaggagaaactgtataccacggaacaagcaaagaggcactagactacttta aaacaataggttacgagatagaggaacacaataacccacctgacttctttcttgacgtcatcagcggtgacgtaaatgtt gatgtagaaacaatacacccaaaacatgatcaagaacaaatacacgaaacactggtcaagcagttcaaaacgtcacaatg gaacaaaagacttatgactgaagtcactcccatcaaagaacaatacgacgaaaatgtccgcaaccaggccgttgttagaa tggcttcagtcaagtatcaaacgtcattctttagacaatttgtattggtgtctggaaggacgatcaagaatctgattagg aacccacagacctccatcatgcaggtgtttggtaatctatcagctgtggaattattcatcaaagaacgagccatctttat acatgagaatgtgagcggcttctacagagtatccgcctactttatagctaaaatttgttgtgatgtgctcccaatgcgtc tgtttccagttactatattttctgtcatcacttttttcatgataggatttgagatgtcagtggaaaagtacttcatctac cttttagcattatttggatcgtccatttccgcttccgggctggccttctttttcagtgccacagttcaaatttttgccat agccaatctatgtatagctttgtgttatgtctttatgatggtttttagtggtttccttttaaacatccaatcaatagcag agtggttgaggtggatccagtgggtcagcatattccgtctagctatcagtgcacttgcaataaatgaactcaaaggacaa gtgtacactaatggaacaataacatgtgggaccggagaagcatacctcgatgcacaagcgattgcctacgacacagactt tgatctctggaagaacattatggccatgttcattatagcagtggtttttatgggattggcatatgtacagctcagacgac ttaaaaagatgaagtag |
|
Protein
| Protein ID | pfu_aug2.0_281.1_03925.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_281.1_03925.t1 MQEGHFAFLPKQERLLNPGEDSYGSMTTKMNGGHTVDVDVERQFSKSGDVKGSTISAHDVHYSVMVRDKPCGDRRRKDIL KNIDCIFKPGMNAILGPTGSGKSSLLDILAGRKDPAGLQGTILIDGAPPPDNFKCMVGYVVQDDVVMGTLTVRENFAFSA ALRLPGSISDNERKERVDNVISELGLSECADTKVGTEFIRGVSGGERKRTNIGMELIISPPVLFLDEPTTGLDANTANSV MLLLRRLALRGRTIIFSIHQPRYSIYRLFDTLMMLSLGETVYHGTSKEALDYFKTIGYEIEEHNNPPDFFLDVISGDVNV DVETIHPKHDQEQIHETLVKQFKTSQWNKRLMTEVTPIKEQYDENVRNQAVVRMASVKYQTSFFRQFVLVSGRTIKNLIR NPQTSIMQVFGNLSAVELFIKERAIFIHENVSGFYRVSAYFIAKICCDVLPMRLFPVTIFSVITFFMIGFEMSVEKYFIY LLALFGSSISASGLAFFFSATVQIFAIANLCIALCYVFMMVFSGFLLNIQSIAEWLRWIQWVSIFRLAISALAINELKGQ VYTNGTITCGTGEAYLDAQAIAYDTDFDLWKNIMAMFIIAVVFMGLAYVQLRRLKKMK |
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