Gene
| Gene Model ID | pfu_aug2.0_281.1_03929 |
|---|---|
| Locus | scaffold281.1 : 219543 ... 221884 : - |
| To GenomeBrowser | scaffold281.1:219543..221884 |
| Genes list of scaffold | scaffold281.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuronal acetylcholine receptor subunit alpha-10 | GO:0005216 GO:0006811 GO:0016020 GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_281.1_03929.t1 | 1 | 1 | Neur_chan_LBD | 34 | 241 | 0.0 | 174.3 | 0.0 | 0.0 | 173.9 |
| pfu_aug2.0_281.1_03929.t1 | 1 | 1 | Neur_chan_memb | 250 | 368 | 8.6e-26 | 91.2 | 2.3e-29 | 1.2e-25 | 90.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_281.1_03929.t1 | gi|260816664|ref|XP_002603208.1| | hypothetical protein BRAFLDRAFT_126983 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_281.1_03929.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_281.1_03929.t1 atgccattgtgtagaggaattattcttcaaactgtcgccttttacatattttatggattatacatgtgtcagtgtcagga gaattataacaattcggtatcgctgtacagatacttgttcaatgaagaacgttatgttcccaacatcatcccggtgtgta acaagggtgaaaacgtgtcgatcagcattgacattgcacttagggaattggtggaacttaatgaaaaatttcaattatta cgtctcaaaatatgggtccgattacaatggacggattgctccctgacgtggtcccccgatgactttgggggtcaggaccg tataatagtgccttacggtacggtgtggatgccggaccttgccatgtacgaggggtgtagtgacgaggctaacatgcccg acatgagggaatatagagccaatgttatgtctgacggatctgtaaggtataatttccctacaatagtaacagcggcatgt cgtatagatgtcacctattttccgtacgactaccagaactgttcattgaccttcagttcctggatgtatagcggggctct agttgacatacaagccctgtccagtgatggtgacactgacaacttcattccccataatgagtggaaactaataagtctga agtccgataaaaaagtcagttattacagctgttgtccggagccctaccctaaagtcatatactatttggtactggccagg tacccaaagttttacctcctgacattgtttttcccgtgtatcattgtgtcactgttgtcgttgttggggtttatgttgcc gcctgtgtcaggtgagaagatttcactacagatcaccatcttactgaccattgtggtgttcctattgttagtacaggaca aactaccttcgtcatcagatacgttcccttatattgggatttacttctccatctctatgattctggtatgtctgtcctgt gtcatgtccggtgtcgttatgtatgtatattttaagggatctaccaaagagaaagtatccccgtggatcaggcgggtgtt tctcacgggcctccgccgtatgttgtgtgtctccgagtccccgagactgtaccaaggggaaaaggaatatgatcaagtga tactacacgacattaaaccacttcacgatagaacacaacaaaaaacgacgtccacaccttcctaccctcatcatgaagta atagggaatggaatgcgtgtgaccgtgtcctgtaacgatataccccattataaggagggtgacagcgacagcttacannn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggggcaaaccaaaa atctga |
|
Protein
| Protein ID | pfu_aug2.0_281.1_03929.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_281.1_03929.t1 MPLCRGIILQTVAFYIFYGLYMCQCQENYNNSVSLYRYLFNEERYVPNIIPVCNKGENVSISIDIALRELVELNEKFQLL RLKIWVRLQWTDCSLTWSPDDFGGQDRIIVPYGTVWMPDLAMYEGCSDEANMPDMREYRANVMSDGSVRYNFPTIVTAAC RIDVTYFPYDYQNCSLTFSSWMYSGALVDIQALSSDGDTDNFIPHNEWKLISLKSDKKVSYYSCCPEPYPKVIYYLVLAR YPKFYLLTLFFPCIIVSLLSLLGFMLPPVSGEKISLQITILLTIVVFLLLVQDKLPSSSDTFPYIGIYFSISMILVCLSC VMSGVVMYVYFKGSTKEKVSPWIRRVFLTGLRRMLCVSESPRLYQGEKEYDQVILHDIKPLHDRTQQKTTSTPSYPHHEV IGNGMRVTVSCNDIPHYKEGDSDSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKPK I |
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