Gene
| Gene Model ID | pfu_aug2.0_281.1_03931 |
|---|---|
| Locus | scaffold281.1 : 274135 ... 294669 : + |
| To GenomeBrowser | scaffold281.1:274135..294669 |
| Genes list of scaffold | scaffold281.1 |
| Synonym | pfu_aug1.0_5555.1_09148 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_281.1_03931.t1 | 1 | 1 | I-set | 26 | 118 | 1.6e-08 | 34.2 | 2.0e-11 | 4.9e-08 | 32.7 |
| pfu_aug2.0_281.1_03931.t1 | 2 | 1 | V-set | 28 | 117 | 1.6e-07 | 31.2 | 4.2e-10 | 1.0e-06 | 28.5 |
| pfu_aug2.0_281.1_03931.t1 | 8 | 1 | DB | 143 | 191 | 0.0 | 159.5 | 2.3e-07 | 0.00057 | 19.8 |
| pfu_aug2.0_281.1_03931.t1 | 8 | 2 | DB | 151 | 241 | 0.0 | 159.5 | 6.6e-15 | 1.6e-11 | 44.0 |
| pfu_aug2.0_281.1_03931.t1 | 4 | 1 | fn3 | 252 | 338 | 1.4013e-45 | 153.7 | 1.2e-08 | 3.0e-05 | 24.0 |
| pfu_aug2.0_281.1_03931.t1 | 4 | 1 | Interfer-bind | 277 | 338 | 1.1e-07 | 31.7 | 0.76 | 1900.0 | -1.1 |
| pfu_aug2.0_281.1_03931.t1 | 8 | 3 | DB | 359 | 456 | 0.0 | 159.5 | 2.6e-14 | 6.5e-11 | 42.1 |
| pfu_aug2.0_281.1_03931.t1 | 4 | 2 | fn3 | 466 | 545 | 1.4013e-45 | 153.7 | 5.1e-15 | 1.3e-11 | 44.4 |
| pfu_aug2.0_281.1_03931.t1 | 4 | 2 | Interfer-bind | 492 | 545 | 1.1e-07 | 31.7 | 0.00014 | 0.34 | 10.9 |
| pfu_aug2.0_281.1_03931.t1 | 8 | 4 | DB | 578 | 671 | 0.0 | 159.5 | 4.3e-18 | 1.1e-14 | 54.2 |
| pfu_aug2.0_281.1_03931.t1 | 2 | 2 | V-set | 639 | 652 | 1.6e-07 | 31.2 | 0.84 | 2100.0 | -1.4 |
| pfu_aug2.0_281.1_03931.t1 | 4 | 3 | fn3 | 681 | 759 | 1.4013e-45 | 153.7 | 2.4e-18 | 6.0e-15 | 55.1 |
| pfu_aug2.0_281.1_03931.t1 | 4 | 3 | Interfer-bind | 710 | 762 | 1.1e-07 | 31.7 | 0.00036 | 0.89 | 9.6 |
| pfu_aug2.0_281.1_03931.t1 | 8 | 5 | DB | 802 | 812 | 0.0 | 159.5 | 0.51 | 1300.0 | -0.5 |
| pfu_aug2.0_281.1_03931.t1 | 8 | 6 | DB | 853 | 897 | 0.0 | 159.5 | 1.2e-06 | 0.003 | 17.5 |
| pfu_aug2.0_281.1_03931.t1 | 8 | 7 | DB | 907 | 965 | 0.0 | 159.5 | 1.0e-11 | 2.6e-08 | 33.7 |
| pfu_aug2.0_281.1_03931.t1 | 4 | 4 | fn3 | 974 | 1051 | 1.4013e-45 | 153.7 | 9.7e-13 | 2.4e-09 | 37.1 |
| pfu_aug2.0_281.1_03931.t1 | 4 | 4 | Interfer-bind | 996 | 1044 | 1.1e-07 | 31.7 | 5.7e-05 | 0.14 | 12.1 |
| pfu_aug2.0_281.1_03931.t1 | 8 | 8 | DB | 999 | 1009 | 0.0 | 159.5 | 6.0 | 15000.0 | -4.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_281.1_03931.t1 | gi|676431256|ref|XP_009046191.1| | hypothetical protein LOTGIDRAFT_171747, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_281.1_03931.t1 | gi|642931031|ref|XP_008196185.1| | PREDICTED: Ig-like and fibronectin type-III domain-containing protein T04A11.3 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_281.1_03931.t1 | gi|270011903|gb|EFA08351.1| | hypothetical protein TcasGA2_TC005994 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_281.1_03931.t1 | gi|512896760|ref|XP_004923987.1| | 0.0 | |
| pfu_aug2.0_281.1_03931.t1 | gi|242011966|ref|XP_002426714.1| | predicted protein [Pediculus humanus corporis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_281.1_03931.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_281.1_03931.t1 atgaacctcatcaaagtacgtctgtctgtgatagccctgtcatgtcttttaataggcggaacttgccaatctcagccaca aatggtatcaacaccacggacggtagaagtagagagtggacagggtactatgttagagtgtgttattcaagaccttggta acagaaaggttatatggacatttgtagatcacaacataacaatagcagatgggagacaaattaaagttcaaactgccaca caaaagtattccattgagcatccactggattctaataatgccatatggagtcttttaataaataacgtacagcaagcaga tgtaggtcattataaatgtcatgtggatggtgccgttaatgtatcagtatcatatcaactggtcttaactggtccctcac caacactcccaccttcaagaaatgtctctgcagaattcaatgtcacagattgttgcatcaacgagcaggtgtcctcagcc tgtatgcctgtttgccaccccagggccatccaaaaccctatcagctttaatatcactgtctgtgctgtagattttctcaa aatcttgaaatgtggatctgatggtaagaaccatgccggatgttgtaagagacgtaatgtaccagatatctgcttagatt actgtatgggacagatgcctgccgttgttacagccgaacacgataagtgtctgaatgatgtaatggacatcatagcatgt tatgaggatgggcagggttatttgccgggccctcccaccttagttagtgccgtccagctacctcttaacagtatgactgc catacaggtcatgtgggtacctcctacagataacttacagatggtcacaggatacagggtgctatacaaactccaatcag agagcacatacaccagttcagatatactgctagtcaatcagagtgccagttatgtgataacaaatgcccagattgagaag acgtacatgatatacgttatatccgtgggagtaaacggggccagccagccgtcacctatgtactatctgactgttatacc aaatataacaagtcaacagggtctaataaaagactgctgcatagagaaaggagtatcagaagactgtctggagccactgt gcggtactaacagaatgttcaacatggatcccaccgttttattcagatgttattctgaccttaacaattcagtacagtgc ctcacaggacagagagaccacagaccttgctgtgagagagtaggaatcccacagaattgtttaacattttgttctggtca agttcctgatattttaggccaagatgcaacacagacatggaactatacaagctgtattatacgtttatccaccatagatg catgtgttcaagaaggaatgtcaactattccgggccctcctatgaatatcagcctatctgtaggtgtgtatagggcgtcg ttatcctgggtccccgcccctggtgctaatgctacaaagtatactgtactttacaaggagagggactctggtaatggtca gcagaaacagttaagtgtaaccggtacttcagcagaaataatgggtctactggccggcacacactatgaggtacaagtgg cagcaagtaacgacaaaggatccagtctcccctcaacaaagattgtcttcctaacctatgaggtgatatttactacacag gccccagttcctactactccaggacaggtgccaagctacaatgaaacagcttgctgcatccagaagaatgtgacgtctac ctgtatgaccctgtgttcttactcctatctatcgagtctgtcgggaatagactgggctctaggataccagtgtgtggacg atttaggcaaagttattgcttgtgctgctgatgagcgtgaccacacagactgttgtaagaggagcggtgtgccagattca tgtctttacttctgccgatttaaacatagcaataacctcacaattagtgacataggttgtgtcccctacacacctataat agccagctgttatagagagggaattgtaagtttaccaaagtctcctcagaatctgacgatcgtacgtgtcacagctcaca cagtcatgttgtcatggaaacagccagacaccacacaagttcccgtgtcatcgtatgaagtgctctatacaacagacatg accaaaaaatggatgtcttcatctacaagtgtaaccacccacatcgttaacaacttgaagcccagtacactttactacgt ccaggttatagcggtaaattctaatggtaccagtctggcatcacccatgataatatttaccaccctggattatgatgatt ctgctccaagtgtaggctgtaactatacaatgtacaaagataccgctctgatttatgacagtatggtctcgtctagtaac actaataccatggaggaatgccgacaggtgtgtgaggatagtggcctacgttttgaccagtgtgtaggattcctgtatgg aagaacagcaggcggagagtgtactctgtactatgacaaaaacgcattccagaaaaaaacaaacaagacagggtttgact tgtatgtcaaaacatgtggtcaatctcctaccattaatacaactattgactggacagccatatggcataacagatcagat tgctgtgacaagaataacgtcagtgatacgtgtttaccagcgtgtaagagtggagaccttaccaaccctttcatctgtga aaatgatttaaatgtacttattgcttgcgctacagatggtaaaaaccacacagattgttgccagaggaaccgtgtacccc agccatgcctgcctttttgtgccggcaaacctatggagaaaaatgccatcacttccctgtgtttatcttttgctccaatt tatataaactgtttcacaaagggaaaaggacagataccttctcctccgacctcattccagattgtcagtgttagcactga cttcgtaacactaagctgggagatgcctgtctccaactgtgatacaaactgctcgtacaaagtcatgatcataaagaagg acggtgccgagttccagaatgcaacaagagataagatgtacaagctgaggaatttgaaaccaagtacaaagtacacctta tcagtggtagccattaatacatacggtagtagtctaccagctcttacgcaggacgtcataacgttaccgtcttctgagaa cttagtggtgattgtacaatatagacatcgtcattaa |
|
Protein
| Protein ID | pfu_aug2.0_281.1_03931.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_281.1_03931.t1 MNLIKVRLSVIALSCLLIGGTCQSQPQMVSTPRTVEVESGQGTMLECVIQDLGNRKVIWTFVDHNITIADGRQIKVQTAT QKYSIEHPLDSNNAIWSLLINNVQQADVGHYKCHVDGAVNVSVSYQLVLTGPSPTLPPSRNVSAEFNVTDCCINEQVSSA CMPVCHPRAIQNPISFNITVCAVDFLKILKCGSDGKNHAGCCKRRNVPDICLDYCMGQMPAVVTAEHDKCLNDVMDIIAC YEDGQGYLPGPPTLVSAVQLPLNSMTAIQVMWVPPTDNLQMVTGYRVLYKLQSESTYTSSDILLVNQSASYVITNAQIEK TYMIYVISVGVNGASQPSPMYYLTVIPNITSQQGLIKDCCIEKGVSEDCLEPLCGTNRMFNMDPTVLFRCYSDLNNSVQC LTGQRDHRPCCERVGIPQNCLTFCSGQVPDILGQDATQTWNYTSCIIRLSTIDACVQEGMSTIPGPPMNISLSVGVYRAS LSWVPAPGANATKYTVLYKERDSGNGQQKQLSVTGTSAEIMGLLAGTHYEVQVAASNDKGSSLPSTKIVFLTYEVIFTTQ APVPTTPGQVPSYNETACCIQKNVTSTCMTLCSYSYLSSLSGIDWALGYQCVDDLGKVIACAADERDHTDCCKRSGVPDS CLYFCRFKHSNNLTISDIGCVPYTPIIASCYREGIVSLPKSPQNLTIVRVTAHTVMLSWKQPDTTQVPVSSYEVLYTTDM TKKWMSSSTSVTTHIVNNLKPSTLYYVQVIAVNSNGTSLASPMIIFTTLDYDDSAPSVGCNYTMYKDTALIYDSMVSSSN TNTMEECRQVCEDSGLRFDQCVGFLYGRTAGGECTLYYDKNAFQKKTNKTGFDLYVKTCGQSPTINTTIDWTAIWHNRSD CCDKNNVSDTCLPACKSGDLTNPFICENDLNVLIACATDGKNHTDCCQRNRVPQPCLPFCAGKPMEKNAITSLCLSFAPI YINCFTKGKGQIPSPPTSFQIVSVSTDFVTLSWEMPVSNCDTNCSYKVMIIKKDGAEFQNATRDKMYKLRNLKPSTKYTL SVVAINTYGSSLPALTQDVITLPSSENLVVIVQYRHRH |
|