Gene
| Gene Model ID | pfu_aug2.0_281.1_03932 |
|---|---|
| Locus | scaffold281.1 : 294745 ... 305336 : + |
| To GenomeBrowser | scaffold281.1:294745..305336 |
| Genes list of scaffold | scaffold281.1 |
| Synonym | pfu_aug1.0_5555.1_09148 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_281.1_03932.t1 | 2 | 1 | Ig_2 | 3 | 18 | 3.5e-06 | 27.0 | 0.15 | 360.0 | 1.3 |
| pfu_aug2.0_281.1_03932.t1 | 2 | 1 | I-set | 6 | 30 | 3.3e-08 | 33.2 | 0.041 | 100.0 | 2.8 |
| pfu_aug2.0_281.1_03932.t1 | 2 | 2 | I-set | 45 | 132 | 3.3e-08 | 33.2 | 5.5e-10 | 1.3e-06 | 28.1 |
| pfu_aug2.0_281.1_03932.t1 | 2 | 2 | Ig_2 | 45 | 121 | 3.5e-06 | 27.0 | 3.5e-08 | 8.6e-05 | 22.5 |
| pfu_aug2.0_281.1_03932.t1 | 2 | 1 | DB | 154 | 249 | 3.2e-16 | 59.1 | 1.3e-19 | 3.2e-16 | 59.1 |
| pfu_aug2.0_281.1_03932.t1 | 1 | 1 | fn3 | 257 | 354 | 2.8e-08 | 33.7 | 7.4e-11 | 1.8e-07 | 31.1 |
| pfu_aug2.0_281.1_03932.t1 | 2 | 2 | DB | 325 | 339 | 3.2e-16 | 59.1 | 6.0 | 15000.0 | -4.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_281.1_03932.t1 | gi|170049506|ref|XP_001856905.1| | conserved hypothetical protein [Culex quinquefasciatus] | 9.0e-26 |
| pfu_aug2.0_281.1_03932.t1 | gi|241595283|ref|XP_002404455.1| | conserved hypothetical protein [Ixodes scapularis] | 2.0e-25 |
| pfu_aug2.0_281.1_03932.t1 | gi|662219473|ref|XP_008483821.1| | PREDICTED: Ig-like and fibronectin type-III domain-containing protein T04A11.3 isoform X3 [Diaphorina citri] | 8.0e-25 |
| pfu_aug2.0_281.1_03932.t1 | gi|662219469|ref|XP_008483819.1| | PREDICTED: Ig-like and fibronectin type-III domain-containing protein T04A11.3 isoform X1 [Diaphorina citri] | 1.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_281.1_03932.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_281.1_03932.t1 atgcgttccttggtagaggaacaggaggggacctatatctgctcagccacagattttgtgaatagtttcaataaatcttt cttccttcagttaaaatacaagccacgtgtagtgaacccaacaggtgatagacagattgttaacagcaataagatcggaa ccttgtcatgtcagttctacggcttaccagacaaaataacgtggcagaaagatggaaagaacgtaaaagacttgtcagac aacttcaggtcctacgctacacagaaaccgatactagggacggcactgattaagtctgtattgtccatatactatgtgac agataaaagtgtcggagactatacttgtattggagaaaataagttcggaaatgccacaggtcacatgagattaacaaatg catatcctacaataccccctcccactgttcctgtgccaagtgtcagaaatgttactgagtgctgtaagatgaacaattta caagatgcttgcttggagatctgccattataacattgacataacattggttttactaaatcctacaagatatgagaattg tttatcacatctacaggtctacatcagctgtgctacagatggcaaggaccacagtaagtgttgtaccaagaagggtgtga cagacagatgtatgccgttctgtgccggtcagtatcctgatgttagggacgaggatgaattgttattctgtgtggcagat ctaccaaccatactcaactgtgtacaggagggtgtcccccatcttccctctcccccacttaacctgaactacaggattga ctctgacaccgtcatacagctattctgggatcctcctatggacaatgctgttaacctcacacattatgtcctgcatatac tcaaaacaggcttccctagcaacatgcaaactctggaatctagctgtggtagagagctatatggtcatgtttggtcccga tggaggggcaaaaaaatctgtaagggcaaaaagaatgtaacatctgtggagctaacaaatctacagcccaacactaatta taactttgaggtggtagctgtaggctatggtcgtagtggaggagcagcccctctcagtggtgacagtatggcaaggaaag ctcttacaggtcaaaatgaaaactacaacaaacctactggtacaggtgcaagtaaaggatcgggatcatctgttggttta ggactaggtctgacagctctattcttggtattagcaggtgctgccgttgctacatttctatactgcaggagaagcagaaa gggaagtccctcacaagctgtctcttttgagaatcctcagtatggaagcagagttcagatatcaggtctccctgataatc actatgacaacacctcgcaggacgagtcattcggatatgccccgcttcgagaggaaacggaaatagaacatcataaccca aagtcgtacgaagcagcaaaactcgatgttagccaaagctga |
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Protein
| Protein ID | pfu_aug2.0_281.1_03932.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_281.1_03932.t1 MRSLVEEQEGTYICSATDFVNSFNKSFFLQLKYKPRVVNPTGDRQIVNSNKIGTLSCQFYGLPDKITWQKDGKNVKDLSD NFRSYATQKPILGTALIKSVLSIYYVTDKSVGDYTCIGENKFGNATGHMRLTNAYPTIPPPTVPVPSVRNVTECCKMNNL QDACLEICHYNIDITLVLLNPTRYENCLSHLQVYISCATDGKDHSKCCTKKGVTDRCMPFCAGQYPDVRDEDELLFCVAD LPTILNCVQEGVPHLPSPPLNLNYRIDSDTVIQLFWDPPMDNAVNLTHYVLHILKTGFPSNMQTLESSCGRELYGHVWSR WRGKKICKGKKNVTSVELTNLQPNTNYNFEVVAVGYGRSGGAAPLSGDSMARKALTGQNENYNKPTGTGASKGSGSSVGL GLGLTALFLVLAGAAVATFLYCRRSRKGSPSQAVSFENPQYGSRVQISGLPDNHYDNTSQDESFGYAPLREETEIEHHNP KSYEAAKLDVSQS |
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