Gene
| Gene Model ID | pfu_aug2.0_281.1_03933 |
|---|---|
| Locus | scaffold281.1 : 339262 ... 340153 : + |
| To GenomeBrowser | scaffold281.1:339262..340153 |
| Genes list of scaffold | scaffold281.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_281.1_03933.t1 | 1 | 1 | Profilin | 5 | 125 | 2.7e-27 | 95.2 | 2.0e-31 | 3.0e-27 | 95.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_281.1_03933.t1 | gi|676439444|ref|XP_009048855.1| | hypothetical protein LOTGIDRAFT_112056 [Lottia gigantea] | 1.0e-26 |
| pfu_aug2.0_281.1_03933.t1 | gi|167517653|ref|XP_001743167.1| | hypothetical protein [Monosiga brevicollis MX1] | 8.0e-26 |
| pfu_aug2.0_281.1_03933.t1 | gi|470444878|ref|XP_004339805.1| | profilin II, putative [Acanthamoeba castellanii str. Neff] | 9.0e-25 |
| pfu_aug2.0_281.1_03933.t1 | gi|524910286|ref|XP_005110024.1| | PREDICTED: profilin-like [Aplysia californica] | 7.0e-23 |
| pfu_aug2.0_281.1_03933.t1 | gi|514682448|ref|XP_004988807.1| | profilin [Salpingoeca rosetta] | 1.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_281.1_03933.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_281.1_03933.t1 atgccaccggcttggaaagagtatgtcagtaatgtgttactggagagcgggtacgtgtcacgagcagctatagtgggtca tgacggcagacgctgggctacgtcaaaggggttcgaaataccgtcatcagaaacactctctattctggacggttacgtag acccgacaaaacttaggacggagggaattattttggcgggaaaagtgtacacatgtacccggatggacagcgtgatcctt gtggggagggaggggcgtaccggatggggatgtatcatatataaatgtaagacttgtctagtgatgggagtttatgaaga aggaacacatcccggaggctgttttaatatgataactaaactcggggactatctacgtgaccaggggttgtga |
|
Protein
| Protein ID | pfu_aug2.0_281.1_03933.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_281.1_03933.t1 MPPAWKEYVSNVLLESGYVSRAAIVGHDGRRWATSKGFEIPSSETLSILDGYVDPTKLRTEGIILAGKVYTCTRMDSVIL VGREGRTGWGCIIYKCKTCLVMGVYEEGTHPGGCFNMITKLGDYLRDQGL |
|