Gene
| Gene Model ID | pfu_aug2.0_2819.1_32314 |
|---|---|
| Locus | scaffold2819.1 : 1 ... 8676 : + |
| To GenomeBrowser | scaffold2819.1:1..8676 |
| Genes list of scaffold | scaffold2819.1 |
| Synonym | pfu_aug1.0_10342.1_10123 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2819.1_32314.t1 | 1 | 1 | SPATA24 | 37 | 163 | 4.2e-32 | 110.9 | 4.7e-35 | 5.9e-32 | 110.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2819.1_32314.t1 | gi|291228056|ref|XP_002733994.1| | PREDICTED: spermatogenesis-associated protein 24-like [Saccoglossus kowalevskii] | 2.0e-31 |
| pfu_aug2.0_2819.1_32314.t1 | gi|632957530|ref|XP_007894530.1| | PREDICTED: spermatogenesis-associated protein 24 [Callorhinchus milii] | 1.0e-26 |
| pfu_aug2.0_2819.1_32314.t1 | gi|505829343|ref|XP_004609974.1| | PREDICTED: spermatogenesis-associated protein 24 [Sorex araneus] | 2.0e-25 |
| pfu_aug2.0_2819.1_32314.t1 | gi|73949218|ref|XP_848301.1| | PREDICTED: spermatogenesis-associated protein 24 isoformX2 [Canis lupus familiaris] | 3.0e-24 |
| pfu_aug2.0_2819.1_32314.t1 | gi|562855339|ref|XP_006156247.1| | PREDICTED: spermatogenesis-associated protein 24 isoform X2 [Tupaia chinensis] | 3.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_2819.1_32314.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2819.1_32314.t1 atttccttgcaagagacttcgctgagagaaagttttacatccagggatacttatgaagaggaattaaggaaattagagag aaccattcaggaggactatgtgagaaggagggatcatgaagacctacaacaaatgcttgaggcggagagggtcagtcaca ctaacacaaaaagacagctgaatgatgtacaagacagactggagtttgctcttggtcaagtggaggtactcacaaagcaa ttagagagggaaaaggcagcatttgagaaggcgtttggaagcatacgatccaaagccatggaagaaacatccaaaaatta caaactagagacaaaatgctcagaaatcagccaacaagtaaaagagaccgaagaaaagctcagtacaaaggacgaagaaa taaaaaatcttgagcagaaactaaaatcccaagaaattacctataaaaaacaattgactgatgcagaaattcagagacga caagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctataaaggtagaataacaataacaaagatctaa |
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Protein
| Protein ID | pfu_aug2.0_2819.1_32314.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2819.1_32314.t1 ISLQETSLRESFTSRDTYEEELRKLERTIQEDYVRRRDHEDLQQMLEAERVSHTNTKRQLNDVQDRLEFALGQVEVLTKQ LEREKAAFEKAFGSIRSKAMEETSKNYKLETKCSEISQQVKETEEKLSTKDEEIKNLEQKLKSQEITYKKQLTDAEIQRR QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKGRITITKI |
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