Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_2819.1_32315
Locus scaffold2819.1 : 8717 ... 19875 : -
To GenomeBrowser scaffold2819.1:8717..19875
Genes list of scaffold scaffold2819.1
Synonym pfu_aug1.0_10342.1_10122

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_2819.1_32315.t1 gi|524870835|ref|XP_005092198.1| PREDICTED: F-box/LRR-repeat protein 15-like [Aplysia californica] 0.0
pfu_aug2.0_2819.1_32315.t1 gi|390367101|ref|XP_003731183.1| 9.99967e-42

Transcript
Transcript IDpfu_aug2.0_2819.1_32315.t1
Definition-
>pfu_aug2.0_2819.1_32315.t1
atgaaagataatggagtgaaagctgcaacagaaaaccaagatgaactagaatgcatagatctgaatgaattacctcagct
gacctctaaagggctaaaatctataaaatctcctacacttacccatgtaaatctgaaaatgtgtcccaacataacctcag
aaggtgtgaggattatagttcagaataacaaaaacatcaaagagattcgcctggctggacgtggcatttcaaagctagat
gactctgtgtactttgccatggcagatggattaggaaatactctggaatacatgaaaagtggtccccacactatgagtga
tgacagtctgaaagtcatagctgtaaaatgttcaaatcttaaagaagtgaacctacatggctgtacaagactaacaggag
aggctatcatagcattatcacaaggttgtaccagcatgacatcattagacctatcttattgtattggtctacgtgggtcc
cccagtaaccagtgtttgtggacccttcccacctctctcacagagctgtctctatgtggtgtgggacttgaggatgagac
cctactggtggaatgtttacagaggctgaaaaagctcaagtctgtcagactgtgcggagtaccagctcttaatgataaaa
cgttggaattgattttgtcggatcttggagaaaatttcctggaccttgacttgagtggtggatctcagagtagtttgact
gatctaggtctagagtctataaccaaatactgtaccaagcttaggtccatcaacctaagcatgtgtcatcagtttaatgg
gatctctctaattccattgtttaaagaccaaagtagggcaggaaagctggaaaaactcttttttagctgcagaaagatag
agtatgatgtactgctggcagctgtagagaactgtgtgaacctggaacacttggacatggcaggtctgaaaatagtcaca
gatgacttactgtccaaactagcagaacactgtcctcgtcttggctggctaggcatcaaaggctgctctcaggtaacaga
tgagggtttatgtaatatagcaagatgctgtgatctgaaaaccattgtactgtcaggtctatccagtatcacagacaaag
caatattttgtatagctaaccattgtcaccatctagaggaaatctacatgaatggatgttcaaagatctcacaaacaaca
ctcaattatctcatggattgctgcatcaaacgtttgtacatccaacatgtaacacccaatgtcataccagaccagctgat
ggcaaagaacctggacacaggagaattctgcagggccgacttacttacatactaa

Protein
Protein IDpfu_aug2.0_2819.1_32315.t1
Definition-
>pfu_aug2.0_2819.1_32315.t1
MKDNGVKAATENQDELECIDLNELPQLTSKGLKSIKSPTLTHVNLKMCPNITSEGVRIIVQNNKNIKEIRLAGRGISKLD
DSVYFAMADGLGNTLEYMKSGPHTMSDDSLKVIAVKCSNLKEVNLHGCTRLTGEAIIALSQGCTSMTSLDLSYCIGLRGS
PSNQCLWTLPTSLTELSLCGVGLEDETLLVECLQRLKKLKSVRLCGVPALNDKTLELILSDLGENFLDLDLSGGSQSSLT
DLGLESITKYCTKLRSINLSMCHQFNGISLIPLFKDQSRAGKLEKLFFSCRKIEYDVLLAAVENCVNLEHLDMAGLKIVT
DDLLSKLAEHCPRLGWLGIKGCSQVTDEGLCNIARCCDLKTIVLSGLSSITDKAIFCIANHCHHLEEIYMNGCSKISQTT
LNYLMDCCIKRLYIQHVTPNVIPDQLMAKNLDTGEFCRADLLTY

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495