Gene
| Gene Model ID | pfu_aug2.0_2819.1_32316 |
|---|---|
| Locus | scaffold2819.1 : 26606 ... 52675 : + |
| To GenomeBrowser | scaffold2819.1:26606..52675 |
| Genes list of scaffold | scaffold2819.1 |
| Synonym | pfu_aug1.0_13100.1_39441 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2819.1_32316.t2 | 3 | 1 | PDZ | 136 | 207 | 1.3e-33 | 115.0 | 3.8e-16 | 1.4e-12 | 47.5 |
| pfu_aug2.0_2819.1_32316.t2 | 2 | 1 | PDZ_2 | 142 | 189 | 6.1e-10 | 38.8 | 5.0e-06 | 0.018 | 14.8 |
| pfu_aug2.0_2819.1_32316.t2 | 3 | 2 | PDZ | 261 | 327 | 1.3e-33 | 115.0 | 6.6e-19 | 2.4e-15 | 56.4 |
| pfu_aug2.0_2819.1_32316.t2 | 2 | 2 | PDZ_2 | 277 | 316 | 6.1e-10 | 38.8 | 5.2e-08 | 0.00019 | 21.2 |
| pfu_aug2.0_2819.1_32316.t2 | 3 | 3 | PDZ | 689 | 725 | 1.3e-33 | 115.0 | 0.00017 | 0.63 | 10.2 |
Transcript
| Transcript ID | pfu_aug2.0_2819.1_32316.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2819.1_32316.t1 atgggtactattgaaatagatgaacgaaaaaagctggccatcgaggagttccaccgagcaacagaagaactgttgtctaa ttcagagtgctatactttatataggatccttaaaacctaccaacgacagagaagggtggataatttggtgaagggagttc tagatgtcatggagtcacgagacaaacagaggctgcttccttatttgaggaacatccttcccagagtccatcttgaggag tttgacaaactgttactcctcttcagatccaggaggcgcaatgaaagccgaaactatttacaggtggaggataggcggtc tcttcacagccaaagaagtgagagaccatttgatgatgtcagtatgacgtcagaggtggatgtgataatgctttataagg acccacgatccccaaaccttggatttagtatcagaggcggatcggagcatgggcttggggtgtatgtcagtgatgtggaa agagggtccgtggcagatgtctgcggcttggcggttggtgataaactactggaggtaaataacataagcttcaagaatct ggccagtagcagcgctaccaaagtccttactggtaccaatcagttaaaactagtggtggagaaaacaggacaagtaccgg agtggagaatttcgaaagaaaagactgcatggtatgacagtcataaacagaagcttgtccagggtgactttgaggaatgt ggcactgcgaatttcattcgcggtttggacgtggacgttccagagaggagagttacgttagagaacaacggcgaacttgg atttaatattaggggaggcaatgagtatggtcttggcatttacgtttcaagagttgataagggaggccaggctgaagaaa acggagtacgtatcggggatcagatcgtcgatgtaaatggaattccatttgagaacattcctcatgctaacgccgtggaa atactgaagtcacagtcccatctaatcatgacattacgggatgttggaagatatcctgcttacaaagaattgtatgcaga atatacatggagtggacgaccgccagaatctccaaggccagttgacgaaaaatacgatgaccatcttcaacttggtgatt taaacagaaagagtagtgagggttttgtacatgtcgaggatagtgaatatgatgtgctgtcagttatgagaaatttcgat gaccagataagttcgattgaacaagaacatcaagcaactacagctattgctgatcataaggagggaaccgacaacgtatc cggactagaatccgaaaacgattttgggattgttgacaaaaccgaagtttcaggtagtagtagaggtaaaaagaaagcga ccgctgacgaaaaatctggaaaatggaaggccatcaaagaaaagcttaaaggcagtcttcgattaaaagcgtccatacga gcaaaattgaaaagatcgagaccacttgtgcctcaaaaggatttttctagaacgccaatcaaccgaatcatgcataaaac aaccatgacttcaaacagtttgaacatattgaaggagtctgcgaggaaacaactttcggagagcgagctggaagtcatga tcagtcatgtaaaagagtaccacgagagtcatgacatagatagtttggtagatgctcttcttcagctcctcatcgaacca gagaagattttgctactacgagatattagaggtatagtgtatccagtagacatgtacagattcgagcaaagagtcaatac gtacgaagtcgaggcatatgagaatctatcgaccaagttacatctgcatctgaaccacgaaaaatataggaaacctaaga agcacctattacatacggaaatagacgaacacggtcacttctacatcaaaccaactgagcagcacgaacatgaacagaga acgaaacagaaagtaatagagataatgtccagtcaaaaaagccaagattacgagatgaccagtatgtcgtccggctcatc atttagacaggagtccataaaaagcgaagctagttcaatggaatcacatgacagccatacttgtgatactgtaactgcgt atatttcaaagaacaaaccgtctcttggtctttgtgtatcgggtggtatagagagtaaaaaacaaccacagatcaaggtg gaacagattttaccaggaggagcggccgaggatatttcccacatacaactagagcaaggactagacatgagtacagaaaa atatcagcaagtaacgggacacagttggttaccattggaattcccacaatttgctgaaagtcattcctcaaaacgaaact aa |
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| Transcript ID | pfu_aug2.0_2819.1_32316.t2 |
| Definition | - |
>pfu_aug2.0_2819.1_32316.t2 atgggtactattgaaatagatgaacgaaaaaagctggccatcgaggagttccaccgagcaacagaagaactgttgtctaa ttcagagtgctatactttatataggatccttaaaacctaccaacgacagagaagggtggataatttggtgaagggagttc tagatgtcatggagtcacgagacaaacagaggctgcttccttatttgaggaacatccttcccagagtccatcttgaggag tttgacaaactgttactcctcttcagatccaggaggcgcaatgaaagccgaaactatttacaggtggaggataggcggtc tcttcacagccaaagaagtgagagaccatttgatgatgtcagtatgacgtcagaggtggatgtgataatgctttataagg acccacgatccccaaaccttggatttagtatcagaggcggatcggagcatgggcttggggtgtatgtcagtgatgtggaa agagggtccgtggcagatgtctgcggcttggcggttggtgataaactactggaggtaaataacataagcttcaagaatct ggccagtagcagcgctaccaaagtccttactggtaccaatcagttaaaactagtggtggagaaaacaggacaagtaccgg agtggagaatttcgaaagaaaagactgcatggtatgacagtcataaacagaagcttgtccagggtgactttgaggaatgt ggcactgcgaatttcattcgcggtttggacgtggacgttccagagaggagagttacgttagagaacaacggcgaacttgg atttaatattaggggaggcaatgagtatggtcttggcatttacgtttcaagagttgataagggaggccaggctgaagaaa acggagtacgtatcggggatcagatcgtcgatgtaaatggaattccatttgagaacattcctcatgctaacgccgtggaa atactgaagtcacagtcccatctaatcatgacattacgggatgttggaagatatcctgcttacaaagaattgtatgcaga atatacatggagtggacgaccgccagaatctccaaggccagttgacgaaaaatacgatgaccatcttcaacttggtgatt taaacagaaagagtagtgagggttttgtacatgtcgaggatagtgaatatgatgtgctgtcagttatgagaaatttcgat gaccagataagttcgattgaacaagaacatcaagcaactacagctattgctgatcataaggagggaaccgacaacgtatc cggactagaatccgaaaacgattttgggattgttgacaaaaccgaagtttcaggtagtagtagaggtaaaaagaaagcga ccgctgacgaaaaatctggaaaatggaaggccatcaaagaaaagcttaaaggcagtcttcgattaaaagcgtccatactg cctcaaaaggatttttctagaacgccaatcaaccgaatcatgcataaaacaaccatgacttcaaacagtttgaacatatt gaaggagtctgcgaggaaacaactttcggagagcgagctggaagtcatgatcagtcatgtaaaagagtaccacgagagtc atgacatagatagtttggtagatgctcttcttcagctcctcatcgaaccagagaagattttgctactacgagatattaga ggtatagtgtatccagtagacatgtacagattcgagcaaagagtcaatacgtacgaagtcgaggcatatgagaatctatc gaccaagttacatctgcatctgaaccacgaaaaatataggaaacctaagaagcacctattacatacggaaatagacgaac acggtcacttctacatcaaaccaactgagcagcacgaacatgaacagagaacgaaacagaaagtaatagagataatgtcc agtcaaaaaagccaagattacgagatgaccagtatgtcgtccggctcatcatttagacaggagtccataaaaagcgaagc tagttcaatggaatcacatgacagccatacttgtgatactgtaactgcgtatatttcaaagaacaaaccgtctcttggtc tttgtgtatcgggtggtatagagagtaaaaaacaaccacagatcaaggtggaacagattttaccaggaggagcggccgag gatatttcccacatacaactagagcaaggactagacatgagtacagaaaaatatcagcaagtaacgggacacagttggtt accattggaattcccacaatttgctgaaagtcattcctcaaaacgaaactaa |
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Protein
| Protein ID | pfu_aug2.0_2819.1_32316.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2819.1_32316.t1 MGTIEIDERKKLAIEEFHRATEELLSNSECYTLYRILKTYQRQRRVDNLVKGVLDVMESRDKQRLLPYLRNILPRVHLEE FDKLLLLFRSRRRNESRNYLQVEDRRSLHSQRSERPFDDVSMTSEVDVIMLYKDPRSPNLGFSIRGGSEHGLGVYVSDVE RGSVADVCGLAVGDKLLEVNNISFKNLASSSATKVLTGTNQLKLVVEKTGQVPEWRISKEKTAWYDSHKQKLVQGDFEEC GTANFIRGLDVDVPERRVTLENNGELGFNIRGGNEYGLGIYVSRVDKGGQAEENGVRIGDQIVDVNGIPFENIPHANAVE ILKSQSHLIMTLRDVGRYPAYKELYAEYTWSGRPPESPRPVDEKYDDHLQLGDLNRKSSEGFVHVEDSEYDVLSVMRNFD DQISSIEQEHQATTAIADHKEGTDNVSGLESENDFGIVDKTEVSGSSRGKKKATADEKSGKWKAIKEKLKGSLRLKASIR AKLKRSRPLVPQKDFSRTPINRIMHKTTMTSNSLNILKESARKQLSESELEVMISHVKEYHESHDIDSLVDALLQLLIEP EKILLLRDIRGIVYPVDMYRFEQRVNTYEVEAYENLSTKLHLHLNHEKYRKPKKHLLHTEIDEHGHFYIKPTEQHEHEQR TKQKVIEIMSSQKSQDYEMTSMSSGSSFRQESIKSEASSMESHDSHTCDTVTAYISKNKPSLGLCVSGGIESKKQPQIKV EQILPGGAAEDISHIQLEQGLDMSTEKYQQVTGHSWLPLEFPQFAESHSSKRN |
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| Protein ID | pfu_aug2.0_2819.1_32316.t2 |
| Definition | - |
>pfu_aug2.0_2819.1_32316.t2 MGTIEIDERKKLAIEEFHRATEELLSNSECYTLYRILKTYQRQRRVDNLVKGVLDVMESRDKQRLLPYLRNILPRVHLEE FDKLLLLFRSRRRNESRNYLQVEDRRSLHSQRSERPFDDVSMTSEVDVIMLYKDPRSPNLGFSIRGGSEHGLGVYVSDVE RGSVADVCGLAVGDKLLEVNNISFKNLASSSATKVLTGTNQLKLVVEKTGQVPEWRISKEKTAWYDSHKQKLVQGDFEEC GTANFIRGLDVDVPERRVTLENNGELGFNIRGGNEYGLGIYVSRVDKGGQAEENGVRIGDQIVDVNGIPFENIPHANAVE ILKSQSHLIMTLRDVGRYPAYKELYAEYTWSGRPPESPRPVDEKYDDHLQLGDLNRKSSEGFVHVEDSEYDVLSVMRNFD DQISSIEQEHQATTAIADHKEGTDNVSGLESENDFGIVDKTEVSGSSRGKKKATADEKSGKWKAIKEKLKGSLRLKASIL PQKDFSRTPINRIMHKTTMTSNSLNILKESARKQLSESELEVMISHVKEYHESHDIDSLVDALLQLLIEPEKILLLRDIR GIVYPVDMYRFEQRVNTYEVEAYENLSTKLHLHLNHEKYRKPKKHLLHTEIDEHGHFYIKPTEQHEHEQRTKQKVIEIMS SQKSQDYEMTSMSSGSSFRQESIKSEASSMESHDSHTCDTVTAYISKNKPSLGLCVSGGIESKKQPQIKVEQILPGGAAE DISHIQLEQGLDMSTEKYQQVTGHSWLPLEFPQFAESHSSKRN |
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