Gene
| Gene Model ID | pfu_aug2.0_282.1_07295 |
|---|---|
| Locus | scaffold282.1 : 199457 ... 241489 : - |
| To GenomeBrowser | scaffold282.1:199457..241489 |
| Genes list of scaffold | scaffold282.1 |
| Synonym | pfu_aug1.0_270.1_07454 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_282.1_07295.t1 | 3 | 1 | Ras | 25 | 49 | 4.6e-14 | 52.1 | 0.00032 | 0.95 | 8.8 |
| pfu_aug2.0_282.1_07295.t1 | 3 | 2 | Ras | 153 | 248 | 4.6e-14 | 52.1 | 5.7e-10 | 1.7e-06 | 27.5 |
| pfu_aug2.0_282.1_07295.t1 | 2 | 1 | RhoGAP | 312 | 346 | 3.5e-39 | 133.8 | 2.4 | 7100.0 | -3.6 |
| pfu_aug2.0_282.1_07295.t1 | 3 | 3 | Ras | 852 | 934 | 4.6e-14 | 52.1 | 8.7e-06 | 0.026 | 13.9 |
| pfu_aug2.0_282.1_07295.t1 | 2 | 2 | RhoGAP | 1366 | 1520 | 3.5e-39 | 133.8 | 4.30058e-42 | 1.3e-38 | 132.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_282.1_07295.t1 | gi|676449479|ref|XP_009052067.1| | hypothetical protein LOTGIDRAFT_115014 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_282.1_07295.t1 | gi|524882362|ref|XP_005097825.1| | PREDICTED: rho GTPase-activating protein 35-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_282.1_07295.t1 | gi|572308258|ref|XP_006619960.1| | PREDICTED: rho GTPase-activating protein 190-like isoform X2 [Apis dorsata] | 0.0 |
| pfu_aug2.0_282.1_07295.t1 | gi|572308262|ref|XP_006619962.1| | PREDICTED: rho GTPase-activating protein 190-like isoform X4 [Apis dorsata] | 0.0 |
| pfu_aug2.0_282.1_07295.t1 | gi|571508057|ref|XP_006571273.1| | PREDICTED: rho GTPase-activating protein 190 isoform X2 [Apis mellifera] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_282.1_07295.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_282.1_07295.t1 atggcaaagaaggtggaggataggacgtttaatatcagcgttataggcttgtcaggaacggaggccgtcaaaggaatgtc aggtgtcggcaagtcttgtttatgtaatcgttttataaatgaaacggcagataagtacttcaccgaacacatttctgtcc tcagcccaagcgatttctctagtcgtgtcatcaacaatgatcacttcttgtactggggagaaacaaccaaaacagacgag ggaaataacttcacatttcatgtcatagagcagacagagttcattgatgacgttagttttcagacgttcaagacagggag gctggatccttatcacaaacgctgtgtgcaatgtaaagtccagtcatcagaaaaattcatgtatatatgcaaagatcagc taggtatggaaacagacagtgtttatgagcagaaggtgatgccagagggaaagctcaacattgatggttttatttgctgc ttcgatgtcagccgtgttcaaaatcgacagcttaaagatcaagttgactttgtgattctacttctaaatggtgcaatgaa aactaagaaaccaattgttttagtgacaaccaaaaccgatgatgcagacgaaatgtctaggaaagagttggagaaaatag tgtccaggaaggaataccgtaacattaacattcccatagtcgaaacaagtgctcatgaaaatgtgaatgtggaacaagca tttcttgtcttagctcaccttatagataagtcaaagcggtataaaatcacgccgttcaacgatgcagtgaaacagaggaa agatttgctagatattgccacggaagcctataagaaattgctgcgacttttaattacagactctaagatggcatggaacg ctgggaggaagaagatagagaaggaatctgattttgaccattatgtagatctgtttggcacagagagtgccaagaaactg ttcagacagcacgtgcgtcagctgagggaagaacagatcagacgacgagagcagtatttcctatctaaactacctgatct cttacaacactaccttccagaccttgacactatcaatgacaggagttggccatcttgtatagcatacatcagcaagcata cagagtttgacagagattttgtccttgtttgtgatgaaggtatgagttggaagtttgtgtccgagtttgtagacaattac tcagaaaccaggattccatttgacttacttggctcaacagaggctgaaaactgcttcagaaatcacctcaatgcactaca agcagagtttaggaagaaagaactgaagaaggcctttaggaaagtgttaacagaaaatccacaagttattccagggaaaa cattggaggaattagaaatattctttctcggaaaagattgttttgtgaacttacaaacgcacgaacgcgaacaagtgttt gaagaacatcaggcagatctaaaacaccgagccaaatgtgaatttcaggaattattatgggagagattagatacatttat acaccaaaggctgttcagtaatacctctgtacaggaagatatacaatatattacagaagatatacaaaatgattctaggt accgtcgtttagacaaacttccagaggaacgacaacttttattgatcaatcatctaggttttatggaatgtccctctcgt gagagatgctttttccaggagaattgtgccgagacacatgtgcaatcagtgctggaggctgcgtccaagacgatcagccg tgagtcccagcggatctcaaatgtgccagaaatagaaaaacagttaaacctggtgttgttaggcaatgaaggtcttgcaa ccaacacttgtaaagaaattaggactctgttccctagtgacaagtttatgtattatgatgcactgtttagcttagattat cgaccaatagaagacgacgttagtttggattacaatgcttttcaaaccgatgactttaaaccacatggttgtatatgtgt ttactcctcacccgactccctacagtatcttaccaacagtctagaggtgactctaaagccagatctgacccctgatggag aagacaaccccctcaaggccctgccctgtatcatcatccaggctcccaactctgaactgtcagaaaaagacttattaaag ctagcagacaaaggaagggatttagctcatgtttaccatggtgaatttatagagattcctatagatgaagacccagaaac agatgccagccaaatagaacttgccttactgtctctggtcagggacactactaacggtcatcaccaatggtcagacgaac ctgaactcaggatagccatgtgtatgatgtgtggtgatgagtatgcagtagacgtccccctggggcctatcctgaacagt aaccccacccagatagagtacgaaaacgagtacaactccatcattatagaggctagcgtagataacaacccacagtatac caaacagaagatagaggtagtggtaggctcgtatcataactttgtggccagggtgttcaaggacgaagaagatgactacc agggctttgtacttgtttattctccgaaaaggaaagcatcttattataccatgaaggccttagctgacaatctgcgacga tttagctccattatccctatactgatattagcggtaacggataatggtttatcatccatgtttttccatgatgagagttc taaggagctgatccaggagggtaaccatctagctaaggatctcggctgtacgtttatgaccaccacagctaactttcaac agcagtcaccaatttacatgtcatttttccaagaggcatggacaaagagagatgagctcggggagtcatactacacagat cctaacagtccgccttacgatgagaagatagataaacggccgcccgcacctttaccaaagtacgataattaccaaactac caaaagcagcaccagtaatagccaaagcacggaggattctgagcctatttacgaccagcctacgggttatgtgcatcatt ctgacagcgagcatgagcgcccctcctcaacctcccctccctcataccgtccccccagtcccccaaatggagaactcggc agagaacaacttgtcagacccagcatgctacgcaaacggcaaggggtaaatgcagcatgggctttgaacgagccaagaaa gcagaagaaagcagcgactttcccgtcggacgttcgacaagccatgccagataatgcagataattggagtgaatctcggc agtctacagggtccaggaattctgacgagacggtttgggcggagaatgacctataccagagagcgtctttctatgaccaa gccaaaccattgcagccaccctcaactagacgtacatcgggtggtatacaggccccgatagctcagcccgagccggacat agccctggcctctgactacgcctcggtacgagatgctgttaacttccagatgccagagaatgactatgcctcggtgggag atgccctaccagcaggcaagctacagaggatactctctcaggacaggaaaaagaaaaaggagggatcagactctgaagac tcagaatttagttccttggagcgtgaaaccaaaaatatcaatatatacagcagagtcaaccgaaaaccgacacctcacaa gaaaaagacgaagcaaaaatcctcacaagacggccaagtttatacaataccggtgtatgtggacgaaagggagaaaactc atcttggtatcaggaggagaggtaactacagagagaagacatatgaaagtatggagaagtacagagagctcaataccctg ccaaagagtaacatgtcaacaagcttggatggggattttgatctgaatgatagcggtaactggacattgtggaagagaaa aggcaaaacaaaggaagaaaagaggattagagatgaagaaaaaaggaagcaaaaagaagagaaagagaaacagaaagagc aacagaaattacaaaagaaaaagaagaaggcattaacagagagtggttatatcaagttaggagaatgtcagatgtccagt agtaacccttctgtaccacagtttgtagaaacctgtgtggagttcctggaggaagaaggaatgaatacagaaggtattta ccgtatacctggtaataaacagcaggtggtagacctacagaacaaacttaatgaagatcctggtattgatatacacactg tagaagatatccaggttaacgctgtggccaccgtccttaaagggttcttcaatgaaactgagccgttaattccgtcttct ctccatgatgagcttctagaggcggcagaaaaattagaggacacgccagggatgccagacaaaagtccgaagttattggc tttaagaggtgttctcagaaagatttacccaacaaattatgaagtactgaaatatttcattacacatttaaacagggtta gtaagcacagctacaagcataatatggacgctcggaacttagcattgtgtttatggccaactatatttagaattgacttc aaatcatatgaaaagatgacgacagggactaagtacccaccagaaatagtccaagttcttatagaacaatgtgggttctt tttccacggtgaagacgagcattgtgactga |
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Protein
| Protein ID | pfu_aug2.0_282.1_07295.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_282.1_07295.t1 MAKKVEDRTFNISVIGLSGTEAVKGMSGVGKSCLCNRFINETADKYFTEHISVLSPSDFSSRVINNDHFLYWGETTKTDE GNNFTFHVIEQTEFIDDVSFQTFKTGRLDPYHKRCVQCKVQSSEKFMYICKDQLGMETDSVYEQKVMPEGKLNIDGFICC FDVSRVQNRQLKDQVDFVILLLNGAMKTKKPIVLVTTKTDDADEMSRKELEKIVSRKEYRNINIPIVETSAHENVNVEQA FLVLAHLIDKSKRYKITPFNDAVKQRKDLLDIATEAYKKLLRLLITDSKMAWNAGRKKIEKESDFDHYVDLFGTESAKKL FRQHVRQLREEQIRRREQYFLSKLPDLLQHYLPDLDTINDRSWPSCIAYISKHTEFDRDFVLVCDEGMSWKFVSEFVDNY SETRIPFDLLGSTEAENCFRNHLNALQAEFRKKELKKAFRKVLTENPQVIPGKTLEELEIFFLGKDCFVNLQTHEREQVF EEHQADLKHRAKCEFQELLWERLDTFIHQRLFSNTSVQEDIQYITEDIQNDSRYRRLDKLPEERQLLLINHLGFMECPSR ERCFFQENCAETHVQSVLEAASKTISRESQRISNVPEIEKQLNLVLLGNEGLATNTCKEIRTLFPSDKFMYYDALFSLDY RPIEDDVSLDYNAFQTDDFKPHGCICVYSSPDSLQYLTNSLEVTLKPDLTPDGEDNPLKALPCIIIQAPNSELSEKDLLK LADKGRDLAHVYHGEFIEIPIDEDPETDASQIELALLSLVRDTTNGHHQWSDEPELRIAMCMMCGDEYAVDVPLGPILNS NPTQIEYENEYNSIIIEASVDNNPQYTKQKIEVVVGSYHNFVARVFKDEEDDYQGFVLVYSPKRKASYYTMKALADNLRR FSSIIPILILAVTDNGLSSMFFHDESSKELIQEGNHLAKDLGCTFMTTTANFQQQSPIYMSFFQEAWTKRDELGESYYTD PNSPPYDEKIDKRPPAPLPKYDNYQTTKSSTSNSQSTEDSEPIYDQPTGYVHHSDSEHERPSSTSPPSYRPPSPPNGELG REQLVRPSMLRKRQGVNAAWALNEPRKQKKAATFPSDVRQAMPDNADNWSESRQSTGSRNSDETVWAENDLYQRASFYDQ AKPLQPPSTRRTSGGIQAPIAQPEPDIALASDYASVRDAVNFQMPENDYASVGDALPAGKLQRILSQDRKKKKEGSDSED SEFSSLERETKNINIYSRVNRKPTPHKKKTKQKSSQDGQVYTIPVYVDEREKTHLGIRRRGNYREKTYESMEKYRELNTL PKSNMSTSLDGDFDLNDSGNWTLWKRKGKTKEEKRIRDEEKRKQKEEKEKQKEQQKLQKKKKKALTESGYIKLGECQMSS SNPSVPQFVETCVEFLEEEGMNTEGIYRIPGNKQQVVDLQNKLNEDPGIDIHTVEDIQVNAVATVLKGFFNETEPLIPSS LHDELLEAAEKLEDTPGMPDKSPKLLALRGVLRKIYPTNYEVLKYFITHLNRVSKHSYKHNMDARNLALCLWPTIFRIDF KSYEKMTTGTKYPPEIVQVLIEQCGFFFHGEDEHCD |
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