Gene
| Gene Model ID | pfu_aug2.0_2822.1_08993 |
|---|---|
| Locus | scaffold2822.1 : 68218 ... 75895 : - |
| To GenomeBrowser | scaffold2822.1:68218..75895 |
| Genes list of scaffold | scaffold2822.1 |
| Synonym | pfu_aug1.0_35934.1_48213 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2822.1_08993.t1 | 1 | 1 | F-box-like | 28 | 68 | 5.0e-06 | 26.1 | 4.1e-09 | 1.0e-05 | 25.1 |
| pfu_aug2.0_2822.1_08993.t1 | 2 | 1 | Sec7 | 96 | 248 | 3.4e-36 | 124.6 | 2.4e-34 | 5.8e-31 | 107.6 |
| pfu_aug2.0_2822.1_08993.t1 | 2 | 2 | Sec7 | 282 | 314 | 3.4e-36 | 124.6 | 4.9e-06 | 0.012 | 15.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2822.1_08993.t1 | gi|524903526|ref|XP_005107962.1| | PREDICTED: F-box only protein 8-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2822.1_08993.t1 | gi|573883735|ref|XP_006630022.1| | PREDICTED: F-box only protein 8-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_2822.1_08993.t1 | gi|499023055|ref|XP_004562292.1| | PREDICTED: F-box only protein 8 [Maylandia zebra] | 0.0 |
| pfu_aug2.0_2822.1_08993.t1 | gi|348530630|ref|XP_003452813.1| | PREDICTED: F-box only protein 8-like isoform X1 [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_2822.1_08993.t1 | gi|584022091|ref|XP_006805703.1| | PREDICTED: F-box only protein 8-like isoform X1 [Neolamprologus brichardi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2822.1_08993.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2822.1_08993.t1 atgggacaggtactaaaacgaatgcaagaagggaatgatgggaagcagacagggaccgtagctacacgcttccccgactt gacggacctacccccggagatcagtatggctatcttatcacatctagatgccactgacctgtgcctggctgcctgtgtgt gggacggactggccaatgatgaaatactctggatggggttatgcaaagactcgtgggggtatgccagtatctataaatat atcaggaatcctcagaatttctcttaccgaaaattgtacttgatgttagatgaaggcagcctgacgtttaatggcaatcc atttgagggtgaggagtatctgataaataaaggccttgttgagaatgatcccatagaactggcaaagttccttcacttta caaagaaaatcaaacctcccaagaaaagggaatatctagataaaagacgtgacgtgttagaacatctgctgaaattacag aattttcgtgatcagtttttgccgaatgcactcaggaaactgtttggcagcatatcagctccggatcaaaggggagacta cttatctgatatcattgacaagtttgccgaaagattctgttcgtgtaatcctaaactgggattagacaaagatacagtat ttgtgctttgtttttcactgatcatgttatctgtggatttatcaagtccgcacgtaaaaaataaaatgtccaagcgtgaa ttcatcaagaacactagacgggcagctaccaccgtggatgatgaccttgctnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaagtccgcacgtaaaaataaaatgtccaagcgtgaattcatcaaga acactagacgggcagctaccaccgtggatgatgaccttgctggtgacctctacgacaacatttatctgattggtcacatt gctaacaacagataa |
|
Protein
| Protein ID | pfu_aug2.0_2822.1_08993.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2822.1_08993.t1 MGQVLKRMQEGNDGKQTGTVATRFPDLTDLPPEISMAILSHLDATDLCLAACVWDGLANDEILWMGLCKDSWGYASIYKY IRNPQNFSYRKLYLMLDEGSLTFNGNPFEGEEYLINKGLVENDPIELAKFLHFTKKIKPPKKREYLDKRRDVLEHLLKLQ NFRDQFLPNALRKLFGSISAPDQRGDYLSDIIDKFAERFCSCNPKLGLDKDTVFVLCFSLIMLSVDLSSPHVKNKMSKRE FIKNTRRAATTVDDDLAXXXXXXXXXXXXXXXXXXXXXKSARKNKMSKREFIKNTRRAATTVDDDLAGDLYDNIYLIGHI ANNR |
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