Gene
| Gene Model ID | pfu_aug2.0_2832.1_08995 |
|---|---|
| Locus | scaffold2832.1 : 46858 ... 50155 : - |
| To GenomeBrowser | scaffold2832.1:46858..50155 |
| Genes list of scaffold | scaffold2832.1 |
| Synonym | pfu_aug1.0_307.1_50784 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| noggin 3 | GO:0007368 GO:0009953 GO:0030514 GO:0035844 GO:0048703 GO:0048793 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2832.1_08995.t1 | 1 | 1 | Noggin | 53 | 248 | 0.0 | 206.0 | 0.0 | 0.0 | 206.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2832.1_08995.t1 | gi|260801044|ref|XP_002595406.1| | hypothetical protein BRAFLDRAFT_113863 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_2832.1_08995.t1 | gi|676479819|ref|XP_009061864.1| | hypothetical protein LOTGIDRAFT_127878 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2832.1_08995.t1 | gi|524888904|ref|XP_005101016.1| | PREDICTED: noggin-2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2832.1_08995.t1 | gi|37606063|emb|CAE49533.1| | noggin 3 [Danio rerio] | 0.0 |
| pfu_aug2.0_2832.1_08995.t1 | gi|432922840|ref|XP_004080385.1| | PREDICTED: noggin-2-like isoform X1 [Oryzias latipes] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2832.1_08995.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2832.1_08995.t1 atgaatttacattcgcatttgagaataactttgaatttactggtgctagtcttgtggacatgtagaagagtgagtggcca gaaagggcgagctaaggcgtactgggacagactgaaacatacggacgacaattcgttctcggggatattccacagtggaa cgaggccggagccatcggaacagctgccggtcatagatttacaggaaagtccggatcccgctcttgatccgaagccggaa aatttggattataggacattaaggagattattaggaaggttttatgatagaaattttatgtccgtggtgacaccaataga acatgtagtcagtcccaatggtactttagaattcaaaatgaggaagaaacgaccgaagggcataaggcccaggtttataa aagactttggtaagccggtttatacaggggatcatacgtttgtgagattacacgtaaacagaaggactagaaagaaagta cagaaatatctgtggaactttacacattgccccgtgtttcatacgtggaaggaccttggcatcagattttggccccggtg gataagggaggggcgttgttatcagggtagatcgtgttctatccctcccggcatgcagtgcaggccaagtagtaaaacta gaaaaactttactccgatggcactgccgaggacccgaaccagggagcaattgtagctggatccgcttccagtacccaata ttgacagagtgttcatgctcttgtccgtcgtga |
|
Protein
| Protein ID | pfu_aug2.0_2832.1_08995.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2832.1_08995.t1 MNLHSHLRITLNLLVLVLWTCRRVSGQKGRAKAYWDRLKHTDDNSFSGIFHSGTRPEPSEQLPVIDLQESPDPALDPKPE NLDYRTLRRLLGRFYDRNFMSVVTPIEHVVSPNGTLEFKMRKKRPKGIRPRFIKDFGKPVYTGDHTFVRLHVNRRTRKKV QKYLWNFTHCPVFHTWKDLGIRFWPRWIREGRCYQGRSCSIPPGMQCRPSSKTRKTLLRWHCRGPEPGSNCSWIRFQYPI LTECSCSCPS |
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