Gene
| Gene Model ID | pfu_aug2.0_2855.1_18942 |
|---|---|
| Locus | scaffold2855.1 : 650 ... 27245 : - |
| To GenomeBrowser | scaffold2855.1:650..27245 |
| Genes list of scaffold | scaffold2855.1 |
| Synonym | pfu_aug1.0_13432.1_68634 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2855.1_18942.t1 | 1 | 1 | Fibrinogen_C | 9 | 172 | 3.08286e-44 | 151.3 | 0.0 | 4.48416e-44 | 150.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2855.1_18942.t1 | gi|395506299|ref|XP_003757472.1| | 2.0e-38 | |
| pfu_aug2.0_2855.1_18942.t1 | gi|701404738|ref|XP_009997288.1| | PREDICTED: fibrinogen C domain-containing protein 1 [Chaetura pelagica] | 5.0e-38 |
| pfu_aug2.0_2855.1_18942.t1 | gi|524906150|ref|XP_005108417.1| | PREDICTED: tenascin-R-like [Aplysia californica] | 7.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_2855.1_18942.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2855.1_18942.t1 atgcgtcagttaatcagagcccttctggttttccaaagacgtcaagatggctccgtggatttctaccggtcatggcagga gtataagacaggttttggagacccagctgcagagcactggttaggtaacgagaagttgcaccagctaacaaacagaaata aaatgtgtgaactctacatatctatggaaagttggaagaacgtggtgggatatgccagatataaaaacttctccattgat gatgaatcaaacgcttatcgactacacatcggcaacttcacaggaaaggacagccttcggtatcacaaaaacatgaagtt cacaaccaaggacatcgacaatgataggagttcttctaactgtgcaacaagtactgattatggggcatggtggtatgaca attgtgatagctgtgggctgaatgggttgtataacgatacaagctccgacaaaggtattgagtgggatggatttactgga ggatctatatacatgaagtttacccaaatgatggtcagcatagctttagtcgctctggtagtttactttgcgacaggaaa caacaacttcatttgtaattgtcagaatcaagatgctgtgacggaaaatgtccatcgaacgccagcacgtctaaaacaac acaaacaccatgccgttatgcacaaattaataccggatgtgaaacacacagtcatgtgtactgcaatacgacacggtgac gtgcaggactgggagtgggtgttcagtaggtataacaacggtacagagacagatcaagaagtcattgtaaaggcattggc gtgttaa |
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Protein
| Protein ID | pfu_aug2.0_2855.1_18942.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2855.1_18942.t1 MRQLIRALLVFQRRQDGSVDFYRSWQEYKTGFGDPAAEHWLGNEKLHQLTNRNKMCELYISMESWKNVVGYARYKNFSID DESNAYRLHIGNFTGKDSLRYHKNMKFTTKDIDNDRSSSNCATSTDYGAWWYDNCDSCGLNGLYNDTSSDKGIEWDGFTG GSIYMKFTQMMVSIALVALVVYFATGNNNFICNCQNQDAVTENVHRTPARLKQHKHHAVMHKLIPDVKHTVMCTAIRHGD VQDWEWVFSRYNNGTETDQEVIVKALAC |
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