Gene
| Gene Model ID | pfu_aug2.0_2855.1_18943 |
|---|---|
| Locus | scaffold2855.1 : 29156 ... 35243 : + |
| To GenomeBrowser | scaffold2855.1:29156..35243 |
| Genes list of scaffold | scaffold2855.1 |
| Synonym | pfu_aug1.0_8827.1_60508 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2855.1_18943.t1 | 2 | 1 | SPRY | 82 | 206 | 3.7e-15 | 56.0 | 7.0e-10 | 2.1e-06 | 27.8 |
| pfu_aug2.0_2855.1_18943.t1 | 2 | 2 | SPRY | 227 | 351 | 3.7e-15 | 56.0 | 1.9e-09 | 5.8e-06 | 26.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2855.1_18943.t1 | gi|676451930|ref|XP_009052867.1| | hypothetical protein LOTGIDRAFT_159930 [Lottia gigantea] | 2.0e-32 |
| pfu_aug2.0_2855.1_18943.t1 | gi|562886876|ref|XP_006170852.1| | PREDICTED: SPRY domain-containing SOCS box protein 2 isoform X1 [Tupaia chinensis] | 7.0e-16 |
| pfu_aug2.0_2855.1_18943.t1 | gi|504173766|ref|XP_004596450.1| | PREDICTED: SPRY domain-containing SOCS box protein 2 [Ochotona princeps] | 9.0e-16 |
| pfu_aug2.0_2855.1_18943.t1 | gi|505830458|ref|XP_004610525.1| | PREDICTED: SPRY domain-containing SOCS box protein 2 [Sorex araneus] | 2.0e-15 |
| pfu_aug2.0_2855.1_18943.t1 | gi|593724456|ref|XP_007108359.1| | PREDICTED: SPRY domain-containing SOCS box protein 2 [Physeter catodon] | 3.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_2855.1_18943.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2855.1_18943.t1 atgaataagagacatttaaaagagttatctgattctttacatgacaaatttcctatagaaagggaatcccaggttgtacc ccccgacccgccagcatggactaccgtggtagtattctgtcagaaatattacaaggacgttctagtggccaacaacaagg tgttccgcattataaacgccaacaccatcgaactacagagtgataatcacactgtcgcagcaagatggagtcgacccatg gcaaaaggcaagcacgtgtttgaaatcgtgtatccatcgcacatgcgcagtgaatttgcatcagttggtataggaacaag aaatgctgacttgcagatcgaaggaagtgcacttttgatcggaaaagatgaaaattcgtggggtgtggacctgaaaactc gaaaggttatgtacgacggtgacgtcatagggaaattcccatcaggattccgtaaaaaggagcttccggatagattcttt ttataccttgacttggatagcggaagtcttatgtttggatcagacgtgacgtactttggaccagccatttgtaaccttga ccttggaggtcgaatggtgtatcttatggtatctgctaaaaactcaggatcggcgatcacagtggtgtatcgtggcagag atcacactgtcgcagcaagatggagtcgacccatggcaaaaggcaagcacgtgtttgaaatcgtgtatccatcgcacatg cgcagtgaatttgcatcagttggtataggaacaagaaatgctgacttgcagattgaaggaagtgcacttttgatcggaaa agacaaaaattcatggggtgtggacctgaaaactcgaaaggtcatgtacgacggtgacgtcatagggaaattcccgtcag gatttcgtaaaaaggaacttccggatagattctttttataccttgacttggataacggaagtcttatgtttggatcagac gtgacgttctttggaccagccatttgtaaccttgaccttggaggtcgaatggtgtatctaatggtatctgctaaaaactc aggatcggcgatcacagtggtgtatcgtggcagaggtaaaattgtgaaagggcctattcatgtacgcaagaaaaggaagc tatga |
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Protein
| Protein ID | pfu_aug2.0_2855.1_18943.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2855.1_18943.t1 MNKRHLKELSDSLHDKFPIERESQVVPPDPPAWTTVVVFCQKYYKDVLVANNKVFRIINANTIELQSDNHTVAARWSRPM AKGKHVFEIVYPSHMRSEFASVGIGTRNADLQIEGSALLIGKDENSWGVDLKTRKVMYDGDVIGKFPSGFRKKELPDRFF LYLDLDSGSLMFGSDVTYFGPAICNLDLGGRMVYLMVSAKNSGSAITVVYRGRDHTVAARWSRPMAKGKHVFEIVYPSHM RSEFASVGIGTRNADLQIEGSALLIGKDKNSWGVDLKTRKVMYDGDVIGKFPSGFRKKELPDRFFLYLDLDNGSLMFGSD VTFFGPAICNLDLGGRMVYLMVSAKNSGSAITVVYRGRGKIVKGPIHVRKKRKL |
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