Gene
| Gene Model ID | pfu_aug2.0_2855.1_18946 |
|---|---|
| Locus | scaffold2855.1 : 53865 ... 63045 : - |
| To GenomeBrowser | scaffold2855.1:53865..63045 |
| Genes list of scaffold | scaffold2855.1 |
| Synonym | pfu_aug1.0_4418.1_08894 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2855.1_18946.t1 | 1 | 1 | Fibrinogen_C | 77 | 214 | 2.3e-34 | 119.0 | 4.0e-38 | 3.0e-34 | 118.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2855.1_18946.t1 | gi|156382297|ref|XP_001632490.1| | predicted protein [Nematostella vectensis] | 2.0e-27 |
| pfu_aug2.0_2855.1_18946.t1 | gi|724871652|ref|XP_010371067.1| | PREDICTED: LOW QUALITY PROTEIN: ficolin-2-like [Rhinopithecus roxellana] | 1.0e-26 |
| pfu_aug2.0_2855.1_18946.t1 | gi|685591143|ref|XP_009186151.1| | PREDICTED: LOW QUALITY PROTEIN: ficolin-2-like [Papio anubis] | 1.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_2855.1_18946.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2855.1_18946.t1 atgtggttcacaacaattcttttgattttcgaaattgctcttagtttgacggatggacataaggagcaccatcttcatga aataaaaaacaaagctacggctttcttgaacaatggcaaattacgtcctaactggcatccagatgggacagtggctgaac tcagtggaccgttatctttaatcctaaaatataaattcaaagctcccttacacaaaaagttcaatgtgacggatatgtat ccaggaaattcagcaatacatgaactgacacaaaaaggttcgtgtgaattgagaatagatatgacaaactggcaaggaac aacaggatatgctaaatatgacagcttcaaaattgagaacgaagcaaatggatttcaactcagaatcggaaaatacactg gaaatgcaggtaaggacagtttggcttaccataacaacatgaagttttcgaccaaggacgtagacaatgataaagatcca aggaagaattgtgcagtttatttcaccggagcatggtgggataataactgtaatcatagtggactgaatggtaactataa agtcactaactcagattcgggggtggaatgggacggatttccgaacggaaagttcatgaagagcacaaaaatgatgttca gatgtaaataa |
|
Protein
| Protein ID | pfu_aug2.0_2855.1_18946.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2855.1_18946.t1 MWFTTILLIFEIALSLTDGHKEHHLHEIKNKATAFLNNGKLRPNWHPDGTVAELSGPLSLILKYKFKAPLHKKFNVTDMY PGNSAIHELTQKGSCELRIDMTNWQGTTGYAKYDSFKIENEANGFQLRIGKYTGNAGKDSLAYHNNMKFSTKDVDNDKDP RKNCAVYFTGAWWDNNCNHSGLNGNYKVTNSDSGVEWDGFPNGKFMKSTKMMFRCK |
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