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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_2856.1_22209
Locus scaffold2856.1 : 42256 ... 45475 : -
To GenomeBrowser scaffold2856.1:42256..45475
Genes list of scaffold scaffold2856.1
Synonym NA

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_2856.1_22209.t1 gi|301113510|ref|XP_002998525.1| hypothetical protein PITG_06395 [Phytophthora infestans T30-4] 5.0e-13
pfu_aug2.0_2856.1_22209.t1 gi|513237391|ref|XP_004950445.1| PREDICTED: uncharacterized protein LOC101752055 [Gallus gallus] 9.0e-13
pfu_aug2.0_2856.1_22209.t1 gi|733921190|ref|XP_010722158.1| PREDICTED: LOW QUALITY PROTEIN: nestin [Meleagris gallopavo] 6.0e-10
pfu_aug2.0_2856.1_22209.t1 gi|170060529|ref|XP_001865844.1| conserved hypothetical protein [Culex quinquefasciatus] 2.0e-06

Transcript
Transcript IDpfu_aug2.0_2856.1_22209.t1
Definition-
>pfu_aug2.0_2856.1_22209.t1
atgaaaagaaaaaaaacactggacaacaagcaagacccatggaacattcagatacaaacactgaacaacaaacaagaccc
atggaacattcagacaaaaacagtgaacaacaaacaagacccatggaacattcagattaaaaacactgaacaacaagcaa
aatccaaagatcattcggacacaaacactgaacaacgagcaagaatcaaagaccattcaaatacaaacactgaacaacga
gcaagacccaacgaacattcagacacaaacactgaactacgagcaagacccaaagaacattcagatacaaacactgaaca
aagagcaagacccaataaacattcgaacacaaacactgaactacgagaaacacccattgaacattcagatacaaacactg
aacagcaaacaagacccatggaacattcagataaaataaacactggacaacaagcaagacccgtggaacattcaggtaaa
aacactgaacaacaaacaagaccaatggaacattcagacaaaaacactgaacaacaaacaagacccatggaactttcaga
tacaaacactgaacaacgagtaagacccaaagaccattcaggcacaaacactggacaacgaggacccactacacattcag
atacaaacactgaacaacgagcaagacataagaaacattcagacacaaacacagagcaacgagcaagacccattacacat
tcagatacaaccagtgagcaacgagcaagacccatggaacatccatatacaaacactgaacaacaagcaagacccaaaga
acattcatacataaacactgagcaacgatcaaaacccatggaatattcagatacaaaccctgtacaacaagcaagaccta
tggaacattcagatacaaacaatgatcaacgagcaagaccaaaagaccattcggacacaaacactgaacaacgagcaaga
cccatggaagattcagatacaaacactgaacaacgagcatga

Protein
Protein IDpfu_aug2.0_2856.1_22209.t1
Definition-
>pfu_aug2.0_2856.1_22209.t1
MKRKKTLDNKQDPWNIQIQTLNNKQDPWNIQTKTVNNKQDPWNIQIKNTEQQAKSKDHSDTNTEQRARIKDHSNTNTEQR
ARPNEHSDTNTELRARPKEHSDTNTEQRARPNKHSNTNTELRETPIEHSDTNTEQQTRPMEHSDKINTGQQARPVEHSGK
NTEQQTRPMEHSDKNTEQQTRPMELSDTNTEQRVRPKDHSGTNTGQRGPTTHSDTNTEQRARHKKHSDTNTEQRARPITH
SDTTSEQRARPMEHPYTNTEQQARPKEHSYINTEQRSKPMEYSDTNPVQQARPMEHSDTNNDQRARPKDHSDTNTEQRAR
PMEDSDTNTEQRA

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