Gene
| Gene Model ID | pfu_aug2.0_286.1_20557 |
|---|---|
| Locus | scaffold286.1 : 1976 ... 25351 : + |
| To GenomeBrowser | scaffold286.1:1976..25351 |
| Genes list of scaffold | scaffold286.1 |
| Synonym | pfu_aug1.0_6856.1_67571 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_286.1_20557.t1 | 9 | 1 | TSP_1 | 407 | 463 | 0.0 | 285.7 | 1.6e-08 | 3.0e-05 | 24.0 |
| pfu_aug2.0_286.1_20557.t1 | 9 | 2 | TSP_1 | 471 | 520 | 0.0 | 285.7 | 1.7e-12 | 3.1e-09 | 36.8 |
| pfu_aug2.0_286.1_20557.t1 | 9 | 3 | TSP_1 | 528 | 564 | 0.0 | 285.7 | 2.6e-11 | 4.8e-08 | 32.9 |
| pfu_aug2.0_286.1_20557.t1 | 9 | 4 | TSP_1 | 642 | 691 | 0.0 | 285.7 | 1.2e-12 | 2.1e-09 | 37.3 |
| pfu_aug2.0_286.1_20557.t1 | 9 | 5 | TSP_1 | 699 | 748 | 0.0 | 285.7 | 1.2e-11 | 2.3e-08 | 34.0 |
| pfu_aug2.0_286.1_20557.t1 | 9 | 6 | TSP_1 | 756 | 805 | 0.0 | 285.7 | 5.4e-13 | 1.0e-09 | 38.3 |
| pfu_aug2.0_286.1_20557.t1 | 9 | 7 | TSP_1 | 813 | 862 | 0.0 | 285.7 | 3.9e-16 | 7.3e-13 | 48.4 |
| pfu_aug2.0_286.1_20557.t1 | 9 | 8 | TSP_1 | 869 | 919 | 0.0 | 285.7 | 3.7e-15 | 6.9e-12 | 45.2 |
| pfu_aug2.0_286.1_20557.t1 | 9 | 9 | TSP_1 | 926 | 976 | 0.0 | 285.7 | 3.1e-13 | 5.8e-10 | 39.1 |
| pfu_aug2.0_286.1_20557.t1 | 3 | 1 | zf-C3HC4 | 1071 | 1115 | 1.5e-07 | 30.9 | 8.1e-11 | 1.5e-07 | 30.9 |
| pfu_aug2.0_286.1_20557.t1 | 3 | 1 | zf-C3HC4_2 | 1071 | 1115 | 2.9e-07 | 30.4 | 1.5e-10 | 2.9e-07 | 30.4 |
| pfu_aug2.0_286.1_20557.t1 | 3 | 2 | zf-C3HC4 | 1156 | 1190 | 1.5e-07 | 30.9 | 1.8 | 3300.0 | -2.2 |
| pfu_aug2.0_286.1_20557.t1 | 3 | 2 | zf-C3HC4_2 | 1156 | 1189 | 2.9e-07 | 30.4 | 0.022 | 41.0 | 4.2 |
| pfu_aug2.0_286.1_20557.t1 | 3 | 3 | zf-C3HC4 | 1214 | 1240 | 1.5e-07 | 30.9 | 8.0 | 15000.0 | -6.4 |
| pfu_aug2.0_286.1_20557.t1 | 3 | 3 | zf-C3HC4_2 | 1214 | 1241 | 2.9e-07 | 30.4 | 0.26 | 480.0 | 0.9 |
Transcript
| Transcript ID | pfu_aug2.0_286.1_20557.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_286.1_20557.t1 atgagcaacaagggaattctgattacagcttccgacgaggtcgtcatttacggcgtgaacaagcagaagcactcaaacga cgctttcctaggtctcccgacggacgtactgggcaaggagtactacgcaacgacgtacgctcctgcatacagatattgct tactcctcgtggttggtgtgcacgataatacgaaggtagagattacattcgccgacaacaacgggatatctgtcagatac ggggggaagacatatggtaaaaagagcaagcttaccctgaatatgaacagatattccacgttccaggctcatacgacagg agatttaactggcacgtacatcaaggcggacaaagccgtcacatttttcagcggtaataaaaagacaaacatcggatccg gcgggtctcaggatcacttggtagaacagcaggtgcccgttgataactggggaaagaaatttgccattcaacccattcca gaacgagtcacaggcgactacttccggtttgtagcgaccgaatcgggaacaagcatcaaagtaaccggacagaaaagcgg acgttccttctccgattcctttaccctctctggtcctggaaaatggaagcagaaacattatgattctaaacttttcgctt atgtagagtctagcaaggccatattggttgtccagtacgtactcagtcaagttaacgacaacgccgatccagccatgttt atcattcctccaatcgagcagtacgccgccgactacactttcgcaacgcctaaatattctggaggcgattattacaacta cttcatgtttgtcgttaaaaaatcagaaaagtcaggactccgtatggacggacaggctttcccatctaacaccaagtata acgacattcccggtactgatctcgtagccggctttatcaagatagctgatggtacacacacagctcgacacacctcgccc atttctatcttcggaggtttcctttacggtcgacaaagacttgaatcctacgcctttccgacaggcatgcgaatggctcc cattaacgtgccatgtgtaccaactacaactcagaccggagacggtatagacaatgattgtgacggactgattgacgagg aaatgtgccatgataactggaaaggaacagatgacgatggtgatggtacaaatgacgaggactgtgctagaccacctccc gtcgatggaaactgggcgtcctggtcgtcatgggcaacatgttccgtttcctgtattcctacttccggtagtcgatcagg gactacaactagaacaagaacttgctcaaatccggctccaaaatatgacggcaaacaatgttctggtgactcgtcccagt ccaaatcttgtacacctagctctaattgtccagtggacggaaaatgggggagctggggttcatggtcgtcttgctcaaaa gtttgtggaggcggaagtcagagtcgatctcgctcttgtaataacccaagtcctgctcacggcggcgcttcatgttctgg aagctcttcctcaatcaagaattgtaacacacacagctgtgcagtaaacggaaactggggtaactgggggagctggggat cgtgttcacttacatgtggtggtggtacatcaacacgaaacagagcgtgcgataacccgccaccacaacacggcggtgct tcatgcagcggaggtgcatcgtctantttgaaaatgttaaaagtttacgacggatggacggacgctggacaccacactat gacaatagctcacttgagcctttggctcagtcttttgtgtttgatgttcctatgtcgtatgaatctgttacgtctcttgc ggtgcttctctactctgagttttcgcattgggtattttgatgccttggtgtggatacttcaaccaattgacggtaaatgg ggaagctggggtagatggggttcctgttccctgacttgtggaggaggtactcagaccagaagtcgatcttgtagtgaccc tgcgccaaaatacggaggtgcttcgtgcagcggaggtgcatcctcctctcaagcctgtaacaccgcaagttgtccaattg acggtggatgggggagttggggacgatgggccacgtgttctttgacatgcggtggcggacgtcaaagtagaacccgatca tgtgacagccctgccccacgttatggaggcgcttcatgtggcggaagctcttcatcgacgcagaattgcaacactcatca ctgtccaattgacggaggttggggaaactggggcgcctgggctacatgctcgctcacatgtggaggcggaagtcagagtc ggacacggtcatgttctaatccggcgcctcagtatggtggggcatcatgtggagggagcagtagatcgacacagtcctgt aatacacacaactgtccgatcgatggaaactggggaaattggggttcatgggcaacgtgttcagtcacatgcggaggtgg aagtcagaaccgacaacggtcatgttcaaatccgagaccacaatatggtggcgccagctgtgtaggaagtgtccaatcaa ctcaagcgtgtaatacacaccattgtccaattgatggtggtttgtcgtcatggagcgcttggggtacgtgcaccgtgact tgtggaggaggaactcaggatagaaccaggacctgtaccaaccctagacctcagtacggcggtgctccttgcagtggaac aacatcccaaacccaagcttgtaacacacaagtgtgcataattgacggggcatggtcacaatggggcgcttggggaactt gttcagttacatgcggaactggtaaacagtctcgctctcgaacttgctctgatccaagacctcttaatggtggacttcca tgttctggtgactcgtcttccatgcaggactgtaacacccaggcttgtccaacagcagccgccggacaatatgtacagct ttgtcccacgggctggttcacatgtcaatcaggaggaattacttgcatcgatgagctgttcaagtgcgactgcgcaagtg attgcgatgacggaagtgacgaagatgtaaattacgctggatgtagtgccaagatggcgtccttctgtcagagtggatca caacgtgttgccgcatggtctctcttactggacgatgaaatgacgatggattcgtcgacaagtgaaacgaccaaaatgga tcttactacttgttcgatttgtttagagacttttaatactcctaaatgttttccctgtttacacagcttttgtgaagggt gtattaaaacttatattactacaactttcgaacaaacaaatggtggagtatcttgtcccgtgtgtcggatgtacgtgcca aaaccggaagatatcagcattgaggattggtcatcaaaaatacctacacaccatttcctggtcagtcttattaatatgaa tgaatctaaaacaggtcgaagtcactgcaaggcatgtgcaagggaaaacgaaactgaaagtgcttcttcgtggtgtataa actgcgctgaatcactatgtaaatcttgtgagagttctcaccgaaggaacaaattcacgtcaaatcataaacttattaac attggaagctctgaactgccaatatataacgccgaaatactatgcaaagagcacccagaagaaaaagtaaaagcttactg tatcgaccactcagttgcatgttgtatgacatgcgtatcactaaagcacagaaagtgtgaaagcgtggagtcaattgatg atgttgctaaacaaaagaaaacatcagaagaaacagaaagcttttcagaagctcttaacgatttcaagagagcacttgaa aaattggtgcaatgcaaaagcgagaaccttcaaacatttgattcagatattcagaatataaaatcagaggtaaatacgat atttacaatgctttccgagcacttgagtcgattacagactgaaacattggaaggaatatctaagattgaaaaagaagtcc gatccgaattagaagataaaccagtcgtattcaaatgcaagatattagcaatcaaaaacgaccttgacttatttcagatc acaaagaaatacgcctcacctgcccaattcgtccaatcaatggaaatgctcatggaccaaagatcagttatcgaacaata tgtgaaagaggaaagtcaaaagctagaggagttaaattccatgccaatgagcaattaa |
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Protein
| Protein ID | pfu_aug2.0_286.1_20557.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_286.1_20557.t1 MSNKGILITASDEVVIYGVNKQKHSNDAFLGLPTDVLGKEYYATTYAPAYRYCLLLVVGVHDNTKVEITFADNNGISVRY GGKTYGKKSKLTLNMNRYSTFQAHTTGDLTGTYIKADKAVTFFSGNKKTNIGSGGSQDHLVEQQVPVDNWGKKFAIQPIP ERVTGDYFRFVATESGTSIKVTGQKSGRSFSDSFTLSGPGKWKQKHYDSKLFAYVESSKAILVVQYVLSQVNDNADPAMF IIPPIEQYAADYTFATPKYSGGDYYNYFMFVVKKSEKSGLRMDGQAFPSNTKYNDIPGTDLVAGFIKIADGTHTARHTSP ISIFGGFLYGRQRLESYAFPTGMRMAPINVPCVPTTTQTGDGIDNDCDGLIDEEMCHDNWKGTDDDGDGTNDEDCARPPP VDGNWASWSSWATCSVSCIPTSGSRSGTTTRTRTCSNPAPKYDGKQCSGDSSQSKSCTPSSNCPVDGKWGSWGSWSSCSK VCGGGSQSRSRSCNNPSPAHGGASCSGSSSSIKNCNTHSCAVNGNWGNWGSWGSCSLTCGGGTSTRNRACDNPPPQHGGA SCSGGASSXLKMLKVYDGWTDAGHHTMTIAHLSLWLSLLCLMFLCRMNLLRLLRCFSTLSFRIGYFDALVWILQPIDGKW GSWGRWGSCSLTCGGGTQTRSRSCSDPAPKYGGASCSGGASSSQACNTASCPIDGGWGSWGRWATCSLTCGGGRQSRTRS CDSPAPRYGGASCGGSSSSTQNCNTHHCPIDGGWGNWGAWATCSLTCGGGSQSRTRSCSNPAPQYGGASCGGSSRSTQSC NTHNCPIDGNWGNWGSWATCSVTCGGGSQNRQRSCSNPRPQYGGASCVGSVQSTQACNTHHCPIDGGLSSWSAWGTCTVT CGGGTQDRTRTCTNPRPQYGGAPCSGTTSQTQACNTQVCIIDGAWSQWGAWGTCSVTCGTGKQSRSRTCSDPRPLNGGLP CSGDSSSMQDCNTQACPTAAAGQYVQLCPTGWFTCQSGGITCIDELFKCDCASDCDDGSDEDVNYAGCSAKMASFCQSGS QRVAAWSLLLDDEMTMDSSTSETTKMDLTTCSICLETFNTPKCFPCLHSFCEGCIKTYITTTFEQTNGGVSCPVCRMYVP KPEDISIEDWSSKIPTHHFLVSLINMNESKTGRSHCKACARENETESASSWCINCAESLCKSCESSHRRNKFTSNHKLIN IGSSELPIYNAEILCKEHPEEKVKAYCIDHSVACCMTCVSLKHRKCESVESIDDVAKQKKTSEETESFSEALNDFKRALE KLVQCKSENLQTFDSDIQNIKSEVNTIFTMLSEHLSRLQTETLEGISKIEKEVRSELEDKPVVFKCKILAIKNDLDLFQI TKKYASPAQFVQSMEMLMDQRSVIEQYVKEESQKLEELNSMPMSN |
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