Gene
| Gene Model ID | pfu_aug2.0_286.1_20561 |
|---|---|
| Locus | scaffold286.1 : 98806 ... 105238 : + |
| To GenomeBrowser | scaffold286.1:98806..105238 |
| Genes list of scaffold | scaffold286.1 |
| Synonym | pfu_aug1.0_9955.1_46132 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_286.1_20561.t1 | 1 | 1 | 7tm_2 | 539 | 780 | 1.9e-18 | 66.4 | 4.2e-22 | 3.1e-18 | 65.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_286.1_20561.t1 | gi|156404556|ref|XP_001640473.1| | predicted protein [Nematostella vectensis] | 7.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_286.1_20561.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_286.1_20561.t1 atggatgttatcgggggtactcaatgcacccaatcagagatcaactcagagatttctgagacatattctacagaagctcc tcttgaatcgaccggaagtacgattacaagtgaaaccagcacggagaaccggtttgactatggactcccttgctctcacg tgggtttatgcagcaaaataacgtcaacgtccgactatagctgttactgcgatcagatctgtcatgcgtatggcgattgt tgctttgacgctcctgattatgcgcatgcgcttgaaaatgtcacatgggataaagccgtacattcacaatgcgtccctat gaaacgtatgtcatccaaaacagtgggcgtcactatggtaacaagttgtccaatggatacctcgtctagctcctgcttta cgggaaatttgacttacccaatgctgtcgcctgtaagcggatatgacggctttatttacatcaacttggcatgtgcaaga tgtcacgacgttgaggaatatagatcgtgggaaattgtgttccgggtagacgagggagagtgtaatgtcaccacaatgga cgtcataacactacaagacaatcttgtggagaagcatgaacaatttacagaatacctcctcgacaaaaattgtgagtata ctttttacgaatcaccgacgctgttttctgagatcccgcgtctctgcttctgggaaacggtccatgttgaagattgtcag aactataccatgccgatgaaagatgtacaatcagcaactttgttcaagaattctgattgctgcttgaagatggctgggaa ttctagtgatatgatctgcgaccctgtttacgatgatggtgcatgtgtctttttccaaagtaaagataagttccagtcca tttaccttgagaacgtactggctaacaagaagacgtcacctcaagccatttcactaagagttcgggactatgaatgcaaa aacggaagtgcgcaatatctgtattgcacgccagtgcgacttatgaattttcgtctgccgatctatttggagctgaatac ccggttgaatgtatcagaggattcactaatcaaagccctgaccgtgttcaagatatatctgtctaacaccatctaccaga tacaaccggaagacgagatagattacctggtcaaaccgatacctgacgtcactgagaactctgacgtcaagaaccaagag tcgtcatttttcttctactttgttctgaggttcaagatgatgttctttgccaaagaggacgtgaatttactgatcgaatg gctgggaaacatagtttttgaattcaaagaaacaattattagcgagaatatgacaacagagtgttttatctacggatcga ctaagccctcagacgaatcgactcagatgtataatgacacgcccatcatggcgctggatttgaaaagcgggtaccacaat tcgtaccatgataaggttacacagagaagggatgtgccattccatatgtgcaagaaggttacattcgatatcacgataaa tggaagtgacgttacatgggcatggcattgcgattacaaatactggtacataacgcgccgtatccctcgagattacgtag caggccctgaagacatattgacgtacacgtgttttactatttcgtgcatcagcttactcttgtcgttcccacttcatcgc tgttcacagatgtccaagacggttcccggcaaaaacatggagaacctgatggtgacgttgttcttgtcccagatgacctt catgtttggtattggtcaagaggagcactcactttgtctggtggcttctataatgattcattatttctacctcagctcct tctgttggatgaatctctgcatggtacatatcatgttcattctttcgaggatgaagaaatatcccaaccagagccttaac tcgggcgccacctgtcggcggttcgctcccttggtcgtcgtcggttataccttaccggcctgcattgtcgtgccatgcgt actctttgatttcgtcctcgaaacggacttcaaggtcggatacaccgaacacggaatttgttttccgtcacattatccgg aaaatctgtacgtgttcgtgattccggtttgcgtttctctggcggtgaacatactctgtctactgcgggtcatattcatc atcaatacggcagttccggatggctttgacaacaccaagtaccgacggtacgtacccgtctacctaaagctcacaatcgt gtccggattgtcctgggtgttcggcattgtgggcgaggctacagctaacgtatttctcaggtattgtttcatcctgttta ctgggttacagggcctgatgctctgtgtatcgtttgtgtttagtgggagtgtgtgggcggacgtcaagtcacgtgttctc tgttgctcggagccagatcccacgtccaccatcattgaactcacgacaaaagattga |
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Protein
| Protein ID | pfu_aug2.0_286.1_20561.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_286.1_20561.t1 MDVIGGTQCTQSEINSEISETYSTEAPLESTGSTITSETSTENRFDYGLPCSHVGLCSKITSTSDYSCYCDQICHAYGDC CFDAPDYAHALENVTWDKAVHSQCVPMKRMSSKTVGVTMVTSCPMDTSSSSCFTGNLTYPMLSPVSGYDGFIYINLACAR CHDVEEYRSWEIVFRVDEGECNVTTMDVITLQDNLVEKHEQFTEYLLDKNCEYTFYESPTLFSEIPRLCFWETVHVEDCQ NYTMPMKDVQSATLFKNSDCCLKMAGNSSDMICDPVYDDGACVFFQSKDKFQSIYLENVLANKKTSPQAISLRVRDYECK NGSAQYLYCTPVRLMNFRLPIYLELNTRLNVSEDSLIKALTVFKIYLSNTIYQIQPEDEIDYLVKPIPDVTENSDVKNQE SSFFFYFVLRFKMMFFAKEDVNLLIEWLGNIVFEFKETIISENMTTECFIYGSTKPSDESTQMYNDTPIMALDLKSGYHN SYHDKVTQRRDVPFHMCKKVTFDITINGSDVTWAWHCDYKYWYITRRIPRDYVAGPEDILTYTCFTISCISLLLSFPLHR CSQMSKTVPGKNMENLMVTLFLSQMTFMFGIGQEEHSLCLVASIMIHYFYLSSFCWMNLCMVHIMFILSRMKKYPNQSLN SGATCRRFAPLVVVGYTLPACIVVPCVLFDFVLETDFKVGYTEHGICFPSHYPENLYVFVIPVCVSLAVNILCLLRVIFI INTAVPDGFDNTKYRRYVPVYLKLTIVSGLSWVFGIVGEATANVFLRYCFILFTGLQGLMLCVSFVFSGSVWADVKSRVL CCSEPDPTSTIIELTTKD |
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