Gene
| Gene Model ID | pfu_aug2.0_286.1_20567 |
|---|---|
| Locus | scaffold286.1 : 223005 ... 254076 : + |
| To GenomeBrowser | scaffold286.1:223005..254076 |
| Genes list of scaffold | scaffold286.1 |
| Synonym | pfu_aug1.0_28284.1_40713 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_286.1_20567.t2 | 3 | 1 | HLH | 673 | 687 | 1.4e-07 | 31.1 | 0.059 | 440.0 | 0.6 |
| pfu_aug2.0_286.1_20567.t2 | 3 | 2 | HLH | 697 | 735 | 1.4e-07 | 31.1 | 3.0e-10 | 2.2e-06 | 27.2 |
| pfu_aug2.0_286.1_20567.t2 | 3 | 3 | HLH | 776 | 788 | 1.4e-07 | 31.1 | 0.044 | 330.0 | 1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_286.1_20567.t2 | gi|729766655|ref|XP_010580477.1| | PREDICTED: MLX-interacting protein isoform X4 [Haliaeetus leucocephalus] | 0.0 |
| pfu_aug2.0_286.1_20567.t2 | gi|558163411|ref|XP_006139662.1| | PREDICTED: LOW QUALITY PROTEIN: MLX interacting protein [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_286.1_20567.t2 | gi|700356977|ref|XP_009922864.1| | PREDICTED: MLX-interacting protein isoform X1 [Haliaeetus albicilla] | 0.0 |
| pfu_aug2.0_286.1_20567.t2 | gi|704468446|ref|XP_010086251.1| | PREDICTED: MLX-interacting protein [Pterocles gutturalis] | 0.0 |
| pfu_aug2.0_286.1_20567.t2 | gi|701367223|ref|XP_009986052.1| | PREDICTED: MLX-interacting protein, partial [Tauraco erythrolophus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_286.1_20567.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_286.1_20567.t1 atgatggcaatagagagagagcaatctgacaatccccactcgtccggtgacatcgagggaaaggatgacaagtacatcca cagtggacatttcatgattagtcgagtccatgataaaaacttggtagacgatgacgacggttcagacgatgacgatgtga atccgtctgatttcgatgtccagggatacaattttgaagatgcaaacaaacaaactacagattcataccagtttggaagt cgaagttcgcacactctggcaatagatgcttcccttacaaaactatttcagtgcatgactttagcttatagtgggaagat cacatcaccacgatggaaagctttcaggggacttcacctagcaatgaaggacaaagtccgactcaacaacattatatgga gggaatggtgcatgcaatatattcacagtcgtaaaccaatcatctgccagtttgcctcgcctctctcagatgatattcac acgaaaccagaggcaatagttttagaaggaaagtattggaagaggaggttggatactgttactgcagagtataaaaaatg gcgcaaatttttcaaatcccgtttatcaaggcgattttccatggacgagaatcactcaaatgccgagttgttgagccgtg taggagacatcacagacattcccagcatgcatcagcaaatgtccgccacagaccttttgataaactctaacactgactta atggacatcgacttcagtagcgatatgttgtttagttccctcaataatcaggcattcaccttccctaatcctagagaact cactggtgtgggcgtggcagatttaatgcagccagggttacttcccttgcagccaaatttagatgattttatggacactt acgatccaatacaagaaatgtttggtctacgttcacaaaatgggaattcaatcctacagttttctagctcccaggagaat gagtcacctatctctggacagtcctccctgactttagaaagtaatatgcaagttgcaaacgatgctaatatccaatcctc acagtctgtgccaataaacttggacgttatgtcgacgccaggcaataataatgccaatatcctcggcactttgttatcag gacttctcaataacgccattgtacagcaacctgccgatcaaaatttgcagcaacaattattaatgcaactgcaaccagca acacaacaacaaagtcttcctgttacgtttgaacttcctaataatcagtcggtagatctcagtaataaaaactcacctag tgttcttggtgctcagtcaactggaactaccaagaaagacgtgtttgccatccctaagagacctgtgaataccagaaagc ctcgaaccatcgccccagctacaacattgtcaaatacaggcacatctacccccaccccctctcaacaatctacgtactta gctcaactacttactaaaggcacatacaaaggagcagtaataacagtaaaaaaagaagcacctgctgcaggagacagggg catagctacatcaccaagctctagtctaccagtaatacagccagccagttcctctacgtcatctgtagtacccatgctgt cagaatttcctgctagtgtactagtccaagcagcaagtcaagctctaggcactaacaccacacaaactaaagatgccctc ggcataatatcatctgctcaagttactaacatcctgtccacgggatctagtcaggccacatccaggatctcagccccaga gagcccacaggataacccatttacaagcccactgatgagcccacaggaaagcccactggcttacaccctgctagatacat cacccaagtcaagcttctctgctgattcaccaggaaaatcagagttaggagagggcaaagctgaacagagacagaaatcc catatctctgctgagcagaaaaggcggttacatatcactctgcttgaatgcgattggtcaagtttagagagtggatttga cctacttcatacattgattccctcccttaaccagaatcctaatgccaaagtcagcaaagccgcaatgttacagaaaactg cagaatattgtaaaaagttgaaggcagaaagaacccaaatgcagagtgaggcagaaatactcaaacaagaaattgactca ttgaacactcagataagccagtgccaactccagctaccagcaacaggtgcccctgtaactcgacaacgagtcgatcaaat gaaagaaatgtttcaggaatatgttaaaagaagaacactgaacaactggaaattctggattttttccacaattattcgag gattgtttgactcatttaacaacatggtgtccacagcgagtatggatgaactttgtcgaactacgctagcttggttagat cagcactgctcgcttgtcgccctcagaccagctgtattgaatgccttacgtaacctcagcacaacaaccagtattctctc cgatccatcaaaaatgccgcaacaagcagcagaagcagtcattaaaggaaataacaaggatctgccgagctga |
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| Transcript ID | pfu_aug2.0_286.1_20567.t2 |
| Definition | - |
>pfu_aug2.0_286.1_20567.t2 atgatggcaatagagagagagcaatctgacaatccccactcgtccggtgacatcgagggaaaggatgacaagtacatcca cagtggacatttcatgattagtcgagtccatgataaaaacttggtagacgatgacgacggttcagacgatgacgatgtga atccgtctgatttcgatgtccagggatacaattttgaagatgcaaacaaacaaactacagattcataccagtttggaagt cgaagttcgcacactctggcaatagatgcttcccttacaaaactatttcagtgcatgactttagcttatagtgggaagat cacatcaccacgatggaaagctttcaggggacttcacctagcaatgaaggacaaagtccgactcaacaacattatatgga gggaatggtgcatgcaatatattcacagtcgtaaaccaatcatctgccagtttgcctcgcctctctcagatgatattcac acgaaaccagaggcaatagttttagaaggaaagtattggaagaggaggttggatactgttactgcagagtataaaaaatg gcgcaaatttttcaaatcccgtttatcaaggcgattttccatggacgagaatcactcaaatgccgagttgttgagccgtg taggagacatcacagacattcccagcatgcatcagcaaatgtccgccacagaccttttgataaactctaacactgactta atggacatcgacttcagtagcgatatgttgtttagttccctcaataatcaggcattcaccttccctaatcctagagaact cactggtgtgggcgtggcagatttaatgcagccagggttacttcccttgcagccaaatttagatgattttatggacactt acgatccaatacaagaaatgtttggtctacgttcacaaaatgggaattcaatcctacagttttctagctcccaggagaat gagtcacctatctctggacagtcctccctgactttagaaagtaatatgcaagttgcaaacgatgctaatatccaatcctc acagtctgtgccaataaacttggacgttatgtcgacgccaggcaataataatgccaatatcctcggcactttgttatcag gacttctcaataacgccattgtacagcaacctgccgatcaaaatttgcagcaacaattattaatgcaactgcaaccagca acacaacaacaaagtcttcctgttacgtttgaacttcctaataatcagtcggtagatctcagtaataaaaactcacctag tgttcttggtgctcagtcaactggaactaccaagaaagacgtgtttgccatccctaagagacctgtgaataccagaaagc ctcgaaccatcgccccagctacaacattgtcaaatacaggcacatctacccccaccccctctcaacaatctacgtactta gctcaactacttactaaagtgaaaatgttaaccaaagattctaacgataatgcacaagaaaaatcatggaaattattaac aaggaaagaagacggggacgtagagtactatactgtcaactcaggcacatacaaaggagcagtaataacagtaaaaaaag aagcacctgctgcaggagacaggggcatagctacatcaccaagctctagtctaccagtaatacagccagccagttcctct acgtcatctgtagtacccatgctgtcagaatttcctgctagtgtactagtccaagcagcaagtcaagctctaggcactaa caccacacaaactaaagatgccctcggcataatatcatctgctcaagttactaacatcctgtccacgggatctagtcagg ccacatccaggatctcagccccagagagcccacaggataacccatttacaagcccactgatgagcccacaggaaagccca ctggcttacaccctgctagatacatcacccaagtcaagcttctctgctgattcaccaggaaaatcagagttaggagaggg caaagctgaacagagacagaaatcccatatctctgctgagcagaaaaggcggttacatatcactctgcttgaatgcgatt ggtcaagtttagagagtggatttgacctacttcatacattgattccctcccttaaccagaatcctaatgccaaagtcagc aaagccgcaatgttacagaaaactgcagaatattgtaaaaagttgaaggcagaaagaacccaaatgcagagtgaggcaga aatactcaaacaagaaattgactcattgaacactcagataagccagtgccaactccagctaccagcaacaggtgcccctg taactcgacaacgagtcgatcaaatgaaagaaatgtttcaggaatatgttaaaagaagaacactgaacaactggaaattc tggattttttccacaattattcgaggattgtttgactcatttaacaacatggtgtccacagcgagtatggatgaactttg tcgaactacgctagcttggttagatcagcactgctcgcttgtcgccctcagaccagctgtattgaatgccttacgtaacc tcagcacaacaaccagtattctctccgatccatcaaaaatgccgcaacaagcagcagaagcagtcattaaaggaaataac aaggatctgccgagctga |
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Protein
| Protein ID | pfu_aug2.0_286.1_20567.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_286.1_20567.t1 MMAIEREQSDNPHSSGDIEGKDDKYIHSGHFMISRVHDKNLVDDDDGSDDDDVNPSDFDVQGYNFEDANKQTTDSYQFGS RSSHTLAIDASLTKLFQCMTLAYSGKITSPRWKAFRGLHLAMKDKVRLNNIIWREWCMQYIHSRKPIICQFASPLSDDIH TKPEAIVLEGKYWKRRLDTVTAEYKKWRKFFKSRLSRRFSMDENHSNAELLSRVGDITDIPSMHQQMSATDLLINSNTDL MDIDFSSDMLFSSLNNQAFTFPNPRELTGVGVADLMQPGLLPLQPNLDDFMDTYDPIQEMFGLRSQNGNSILQFSSSQEN ESPISGQSSLTLESNMQVANDANIQSSQSVPINLDVMSTPGNNNANILGTLLSGLLNNAIVQQPADQNLQQQLLMQLQPA TQQQSLPVTFELPNNQSVDLSNKNSPSVLGAQSTGTTKKDVFAIPKRPVNTRKPRTIAPATTLSNTGTSTPTPSQQSTYL AQLLTKGTYKGAVITVKKEAPAAGDRGIATSPSSSLPVIQPASSSTSSVVPMLSEFPASVLVQAASQALGTNTTQTKDAL GIISSAQVTNILSTGSSQATSRISAPESPQDNPFTSPLMSPQESPLAYTLLDTSPKSSFSADSPGKSELGEGKAEQRQKS HISAEQKRRLHITLLECDWSSLESGFDLLHTLIPSLNQNPNAKVSKAAMLQKTAEYCKKLKAERTQMQSEAEILKQEIDS LNTQISQCQLQLPATGAPVTRQRVDQMKEMFQEYVKRRTLNNWKFWIFSTIIRGLFDSFNNMVSTASMDELCRTTLAWLD QHCSLVALRPAVLNALRNLSTTTSILSDPSKMPQQAAEAVIKGNNKDLPS |
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| Protein ID | pfu_aug2.0_286.1_20567.t2 |
| Definition | - |
>pfu_aug2.0_286.1_20567.t2 MMAIEREQSDNPHSSGDIEGKDDKYIHSGHFMISRVHDKNLVDDDDGSDDDDVNPSDFDVQGYNFEDANKQTTDSYQFGS RSSHTLAIDASLTKLFQCMTLAYSGKITSPRWKAFRGLHLAMKDKVRLNNIIWREWCMQYIHSRKPIICQFASPLSDDIH TKPEAIVLEGKYWKRRLDTVTAEYKKWRKFFKSRLSRRFSMDENHSNAELLSRVGDITDIPSMHQQMSATDLLINSNTDL MDIDFSSDMLFSSLNNQAFTFPNPRELTGVGVADLMQPGLLPLQPNLDDFMDTYDPIQEMFGLRSQNGNSILQFSSSQEN ESPISGQSSLTLESNMQVANDANIQSSQSVPINLDVMSTPGNNNANILGTLLSGLLNNAIVQQPADQNLQQQLLMQLQPA TQQQSLPVTFELPNNQSVDLSNKNSPSVLGAQSTGTTKKDVFAIPKRPVNTRKPRTIAPATTLSNTGTSTPTPSQQSTYL AQLLTKVKMLTKDSNDNAQEKSWKLLTRKEDGDVEYYTVNSGTYKGAVITVKKEAPAAGDRGIATSPSSSLPVIQPASSS TSSVVPMLSEFPASVLVQAASQALGTNTTQTKDALGIISSAQVTNILSTGSSQATSRISAPESPQDNPFTSPLMSPQESP LAYTLLDTSPKSSFSADSPGKSELGEGKAEQRQKSHISAEQKRRLHITLLECDWSSLESGFDLLHTLIPSLNQNPNAKVS KAAMLQKTAEYCKKLKAERTQMQSEAEILKQEIDSLNTQISQCQLQLPATGAPVTRQRVDQMKEMFQEYVKRRTLNNWKF WIFSTIIRGLFDSFNNMVSTASMDELCRTTLAWLDQHCSLVALRPAVLNALRNLSTTTSILSDPSKMPQQAAEAVIKGNN KDLPS |
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