Gene
| Gene Model ID | pfu_aug2.0_2864.1_15651 |
|---|---|
| Locus | scaffold2864.1 : 15236 ... 21235 : - |
| To GenomeBrowser | scaffold2864.1:15236..21235 |
| Genes list of scaffold | scaffold2864.1 |
| Synonym | pfu_aug1.0_3477.1_66703 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2864.1_15651.t1 | 1 | 1 | 7tm_1 | 90 | 239 | 5.2e-11 | 42.1 | 4.3e-15 | 6.4e-11 | 41.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2864.1_15651.t1 | gi|390342451|ref|XP_003725667.1| | 1.0e-06 | |
| pfu_aug2.0_2864.1_15651.t1 | gi|260841337|ref|XP_002613873.1| | hypothetical protein BRAFLDRAFT_208548 [Branchiostoma floridae] | 8.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_2864.1_15651.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2864.1_15651.t1 atgacaaagacttgttggaggaatgtgcgatatgacgcacaattcaagaggatatcggctaagaacgtcgaagaagtgaa tgcaaggaacatgccaagtatatataacagtatgacatgtcgttgtattcaaagatattggcgtgagggggtccaaggag caggaggaaaccggagtacccggagaaaaccccctgcagaggcctgggtgggggaccacctaccctcccacataggaccc ttcgccgaatctgggattcgatcccgggaccttagagatataggatgcaagttgattgtattctttgttgtatttactat gatgacctcagatgggttcttactggcgatagcaatacaaagatataggaagatatgtcttccttttggtaagtacatgt ccctcaaatggaggaggattagtgtggtggcagtcatatttgctggacttgtctactctgtaccgtctttaacagtagcc ggtgtctcagatttcgttatagagtataaaggagtcaacataagtggacttagctgttacaacgggaataaggagtatcc attactacaaagtatatatcatatagtcttaactgttgttggaactgcaaatataattctaacggctgggatgtatgctc ccatagcagttattatcattaggagacaaagaaagaagccatcaatcggacaaagacttgagatgagccccgagaaaaaa tcggacggtaacgcgaactgcactttggaaaaggctttttcggttaatgccgagcgtgacttagagaaacagacgcaaat taattcaaaattccattttgattcatcttccgctttaacaggagagaacaaattaggagatgccacgaaaggaggaagga aggatagcaatgattcggtttccacgggcttgaggaaaaacaaatnggaagaagccattaatcggacaaagacttga |
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Protein
| Protein ID | pfu_aug2.0_2864.1_15651.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2864.1_15651.t1 MTKTCWRNVRYDAQFKRISAKNVEEVNARNMPSIYNSMTCRCIQRYWREGVQGAGGNRSTRRKPPAEAWVGDHLPSHIGP FAESGIRSRDLRDIGCKLIVFFVVFTMMTSDGFLLAIAIQRYRKICLPFGKYMSLKWRRISVVAVIFAGLVYSVPSLTVA GVSDFVIEYKGVNISGLSCYNGNKEYPLLQSIYHIVLTVVGTANIILTAGMYAPIAVIIIRRQRKKPSIGQRLEMSPEKK SDGNANCTLEKAFSVNAERDLEKQTQINSKFHFDSSSALTGENKLGDATKGGRKDSNDSVSTGLRKNKXEEAINRTKT |
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